DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-lambda and negr1

DIOPT Version :9

Sequence 1:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_009300786.1 Gene:negr1 / 445374 ZFINID:ZDB-GENE-040822-27 Length:360 Species:Danio rerio


Alignment Length:349 Identity:93/349 - (26%)
Similarity:148/349 - (42%) Gaps:59/349 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 VPIGRDISFTCVVDNL----------------GHYRVAWIKSDSKAILGIHTHMVSLNPRLSVTH 109
            :|.|:.:.:|...:::                |..:.||:...|  |:.......|.:||:|:..
Zfish    32 LPAGQTVDYTTSSESVVSRQGDTALLRCYLLDGISKGAWLNRSS--IIYAGNDKWSGDPRVSIVS 94

  Fly   110 N--GHNTWKLHISRVQINDSGSYMCQVNTDPMKSLSG---YLDVVVPPDILNHPEHNPEDGVCQE 169
            |  ..:.:.|.|.:|.:.|.|.|.|.:.::  ::|..   .|.|.|||.|.:    ...|....|
Zfish    95 NVGDKHEYSLQIQKVDVTDEGVYTCSIQSE--RNLHPKLIQLIVKVPPKIYD----ISSDITVNE 153

  Fly   170 GGSISLMCSVTGVPRPKVLWRREAGKEIILRTDGRDKTGFKSVEGERLVLTNVQRSDMGGYNCIA 234
            |.::||:|:.:|.|.||:.||.       :....|     |...||.|.:|.:.|...|.|.|.|
Zfish   154 GSNVSLICAASGKPEPKISWRH-------ISPSAR-----KYESGEYLNITGISRDQAGDYECGA 206

  Fly   235 SNGIPPSVSKRFNVYVNFSPTVKAISQLVGAPVEREVTLECIVEVFPKPLNGWYRSEGNIKLHNG 299
            .|.|....:|...|.|||.|.:..:.. .|....:...|.|.....|.|:..||:.|..|.:..|
Zfish   207 ENDIASPDTKTVRVTVNFPPAIHEMKS-HGVRPGQVALLRCEAAAVPSPVFEWYKGEKRINMGQG 270

  Fly   300 NKYNISEEVINIYTWHLNLTIRHLTKSDFGTYSCSSVNALGKSESLIRLQELRLPPKLTTTPTPH 364
                   .|||..:....||::::|:..:|.|:|.:||.||.:.:.:.|..:..|   |||    
Zfish   271 -------IVINNLSSRSVLTVKNMTQDRYGNYTCVAVNRLGTANASVPLNPIIEP---TTT---- 321

  Fly   365 MQTTGKSRRKHPASH-KKGLNEVL 387
              :...|...:||.: ..|..|||
Zfish   322 --SAVSSPASNPAMYGSTGGAEVL 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-lambdaNP_001334747.1 None
negr1XP_009300786.1 Ig 42..121 CDD:299845 17/80 (21%)
IG_like 44..136 CDD:214653 19/95 (20%)
I-set 140..222 CDD:254352 29/97 (30%)
IGc2 153..208 CDD:197706 22/66 (33%)
IG_like 236..312 CDD:214653 22/82 (27%)
IGc2 238..304 CDD:197706 20/72 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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