DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-lambda and TMIGD1

DIOPT Version :9

Sequence 1:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_996663.1 Gene:TMIGD1 / 388364 HGNCID:32431 Length:262 Species:Homo sapiens


Alignment Length:269 Identity:63/269 - (23%)
Similarity:115/269 - (42%) Gaps:65/269 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FILIKAITITK--CHAVAHIHGKGESEEIDPQFLAKLSNTTVPIGRDISFTCVVDNLGHYR---V 81
            |:|:..:.:.:  ..:|..::||.|:..:|          |.| |...|..|.|.|  |.|   :
Human    14 FLLLVILFLPREMTSSVLTVNGKTENYILD----------TTP-GSQASLICAVQN--HTREEEL 65

  Fly    82 AWIKSDSKAILGIHTHMVSLNPRLSVTHNGHNTWKLHISRVQINDSG-SYMCQVNTDPMKSLSGY 145
            .|.:.:.:..|              .:.|..|:..:.:|.:..||:| |:.|::..|...|:|..
Human    66 LWYREEGRVDL--------------KSGNKINSSSVCVSSISENDNGISFTCRLGRDQSVSVSVV 116

  Fly   146 LDVVVPPDILNHPEHNPEDGVCQEGGSISLMCSVTGVPRPKVLWRR-------EAGKEIILRTDG 203
            |:|..||.:..:.....|     ||.::.|:|:|...|:.:::|.:       |..:..|.:|. 
Human   117 LNVTFPPLLSGNDFQTVE-----EGSNVKLVCNVKANPQAQMMWYKNSSLLDLEKSRHQIQQTS- 175

  Fly   204 RDKTGFKSVEGERLVLTNVQRSDMGGYNCIASNGIPPSVSKRFNVYVNFSPTVKAISQLVGAPVE 268
                     |..:|.:|.|::.|.|.|:|||.:.: .:.|..|::.|.        .:.||.|:|
Human   176 ---------ESFQLSITKVEKPDNGTYSCIAKSSL-KTESLDFHLIVK--------DKTVGVPIE 222

  Fly   269 REVTLECIV 277
             .:...|:|
Human   223 -PIIAACVV 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-lambdaNP_001334747.1 None
TMIGD1NP_996663.1 IG 131..212 CDD:214652 23/96 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11661
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.