DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-lambda and HSPG2

DIOPT Version :10

Sequence 1:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_011539620.1 Gene:HSPG2 / 3339 HGNCID:5273 Length:4574 Species:Homo sapiens


Alignment Length:555 Identity:127/555 - (22%)
Similarity:195/555 - (35%) Gaps:119/555 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NGTLACSIAFILIKAITITKCHAVAHIHGKGESEEIDPQFLAKLSNTTVPIGRDISFTCVVDNLG 77
            :|||..|:      .:|| :..:...|...|.::.|    ..:.|::.|..|:.:...|||....
Human  3082 SGTLEASV------LVTI-EPSSPGPIPAPGLAQPI----YIEASSSHVTEGQTLDLNCVVPGQA 3135

  Fly    78 HYRVAWIKSDSKAILGIHTHMVSLNPRLSVTHNGHNTWKLHISRVQINDSGSYMCQVNTDPMKSL 142
            |.:|.|.|....               |...|..|.: :|.:..|...|||.|:|:..:.|....
Human  3136 HAQVTWYKRGGS---------------LPARHQTHGS-QLRLHLVSPADSGEYVCRAASGPGPEQ 3184

  Fly   143 SGYLDVVVPPD-----ILNHP--EHNPEDGVCQEGGSISLMCSVTGVPRPKVL-WRREAGKEIIL 199
            .....|.|||.     .|..|  ..:|.....|:|...|..|.:.....|..| |:        .
Human  3185 EASFTVTVPPSEGSSYRLRSPVISIDPPSSTVQQGQDASFKCLIHDGAAPISLEWK--------T 3241

  Fly   200 RTDGRDKTGFKSVEGERLVLTNVQRSDMGGYNCIASN--GIPPSVSKRFNVYVNFSPTVKAISQ- 261
            |....:.....|..|..:.:...:.|:.|.|.|:|||  |:..||   .|:.|:..|||..:.: 
Human  3242 RNQELEDNVHISPNGSIITIVGTRPSNHGTYRCVASNAYGVAQSV---VNLSVHGPPTVSVLPEG 3303

  Fly   262 LVGAPVEREVTLECIVEVFPKPLNGWYR-SEGNIKLHNGNKYNISEEVINIYTWHLNLTIRHLTK 325
            .|...|.:.|||||:....|:....|.| |....||.. ..|.:.:.       |..|.|.....
Human  3304 PVWVKVGKAVTLECVSAGEPRSSARWTRISSTPAKLEQ-RTYGLMDS-------HAVLQISSAKP 3360

  Fly   326 SDFGTYSCSSVNALGKSESLIRL----------------QELRLPPKLTTTPTPHMQTTGKSRRK 374
            ||.|||.|.:.||||.::..:.:                :|..|..:...|.|.....||...  
Human  3361 SDAGTYVCLAQNALGTAQKQVEVIVDTGAMAPGAPQVQAEEAELTVEAGHTATLRCSATGSPA-- 3423

  Fly   375 HPASHKKGLNEVLRFQ-----ETHFANQIQQENEDHNEGFDLLKFTNSENSNIVLESGHINSMIN 434
             |..|...|...|.:|     :|....::.|::            :.....|....:||..:.| 
Human  3424 -PTIHWSKLRSPLPWQHRLEGDTLIIPRVAQQD------------SGQYICNATSPAGHAEATI- 3474

  Fly   435 KEDVNIYHPKQYGQEKTNKPSGTIPSTRTPWILTNAGSQRPALTSYATVALITSFWLFFW-RVFH 498
                 |.|.:......|.....::.:..|..:...|.. .|.||             |.| ||..
Human  3475 -----ILHVESPPYATTVPEHASVQAGETVQLQCLAHG-TPPLT-------------FQWSRVGS 3520

  Fly   499 SLDWDAIRVSSVVHHVVVFKRRSYFEAPNYALRIT 533
            ||...|...:.::|    |:|.:..::..|..|:|
Human  3521 SLPGRATARNELLH----FERAAPEDSGRYRCRVT 3551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-lambdaNP_001334747.1 IG_like 57..150 CDD:214653 22/92 (24%)
Ig strand B 67..71 CDD:409353 0/3 (0%)
Ig strand E 115..119 CDD:409353 1/3 (33%)
Ig strand F 129..134 CDD:409353 2/4 (50%)
Ig 153..250 CDD:472250 24/106 (23%)
Ig strand B 173..177 CDD:409353 1/3 (33%)
Ig strand C 186..190 CDD:409353 1/4 (25%)
Ig strand E 204..219 CDD:409353 2/14 (14%)
Ig strand F 229..234 CDD:409353 2/4 (50%)
Ig strand G 243..246 CDD:409353 0/2 (0%)
IG_like 271..349 CDD:214653 25/94 (27%)
Ig strand B 271..275 CDD:409353 3/3 (100%)
Ig strand C 284..288 CDD:409353 0/3 (0%)
Ig strand E 308..320 CDD:409353 2/11 (18%)
Ig strand F 330..335 CDD:409353 3/4 (75%)
HSPG2XP_011539620.1 Ig strand G 3834..3837 CDD:409353
LamG 3848..4008 CDD:238058
EGF_CA <4035..4064 CDD:238011
EGF_CA <4076..4105 CDD:238011
LamG 4117..4266 CDD:238058
EGF 4291..4321 CDD:394967
EGF_CA 4328..4359 CDD:238011
LamG 4386..4545 CDD:238058
SEA 80..193 CDD:214554
LDLa 216..251 CDD:238060
LDLa 302..336 CDD:238060
LDLa 342..376 CDD:238060
LDLa 385..420 CDD:238060
Ig_Perlecan_like 438..515 CDD:143220
Ig strand B 441..447 CDD:143220
Ig strand C 454..459 CDD:143220
Ig strand E 479..483 CDD:143220
Ig strand F 492..498 CDD:143220
Ig strand G 507..513 CDD:143220
LamB 608..734 CDD:214597
EGF_Lam 782..824 CDD:238012
EGF_Lam 831..888 CDD:238012
Laminin_EGF 897..939 CDD:395007
LamB 1003..1130 CDD:214597
EGF_Lam 1176..1225 CDD:238012
EGF_Lam 1227..1282 CDD:238012
Laminin_EGF 1293..1340 CDD:395007
LamB 1574..1699 CDD:214597
EGF_Lam 1746..1794 CDD:238012
Laminin_EGF 1796..1851 CDD:395007
IG_like 1866..1946 CDD:214653
Ig strand B 1877..1881 CDD:409353
Ig strand C 1890..1895 CDD:409353
Ig strand E 1912..1916 CDD:409353
Ig strand F 1926..1931 CDD:409353
Ig strand G 1939..1942 CDD:409353
IgI_Perlecan_like 1954..2039 CDD:409412
Ig strand A 1954..1958 CDD:409412
Ig strand A' 1963..1966 CDD:409412
Ig strand B 1970..1980 CDD:409412
Ig strand C 1986..1990 CDD:409412
Ig strand C' 1993..1995 CDD:409412
Ig strand D 2000..2005 CDD:409412
Ig strand E 2006..2012 CDD:409412
Ig strand F 2019..2027 CDD:409412
Ig strand G 2030..2039 CDD:409412
Ig 2049..2133 CDD:472250
Ig strand B 2066..2070 CDD:409353
Ig strand C 2079..2082 CDD:409353
Ig strand E 2099..2103 CDD:409353
Ig strand F 2113..2118 CDD:409353
Ig strand G 2126..2129 CDD:409353
I-set 2139..2225 CDD:400151
Ig strand B 2156..2160 CDD:409353
Ig strand C 2169..2173 CDD:409353
Ig strand E 2191..2195 CDD:409353
Ig strand F 2205..2210 CDD:409353
IG_like 2240..2317 CDD:214653
Ig strand B 2251..2255 CDD:409353
Ig strand C 2264..2268 CDD:409353
Ig strand E 2284..2287 CDD:409353
Ig strand F 2297..2302 CDD:409353
Ig strand G 2310..2313 CDD:409353
IG_like 2341..2418 CDD:214653
Ig strand B 2352..2356 CDD:409353
Ig strand C 2365..2369 CDD:409353
Ig strand E 2384..2388 CDD:409353
Ig strand F 2398..2403 CDD:409353
Ig strand G 2411..2414 CDD:409353
IG_like 2434..2508 CDD:214653
Ig strand B 2445..2449 CDD:409353
Ig strand C 2458..2462 CDD:409353
Ig strand E 2478..2481 CDD:409353
Ig strand F 2491..2496 CDD:409353
IG_like 2530..2607 CDD:214653
Ig strand C 2554..2558 CDD:409353
Ig strand E 2573..2577 CDD:409353
Ig strand F 2587..2592 CDD:409353
Ig 2620..2703 CDD:472250
Ig strand C 2650..2654 CDD:409353
Ig strand E 2669..2673 CDD:409353
Ig strand F 2683..2688 CDD:409353
IG_like 2731..2800 CDD:214653
Ig strand C 2747..2751 CDD:409353
Ig strand E 2766..2770 CDD:409353
Ig strand F 2780..2785 CDD:409353
IG_like 2819..2896 CDD:214653
Ig strand C 2843..2847 CDD:409353
Ig strand E 2862..2866 CDD:409353
Ig strand F 2876..2881 CDD:409353
Ig strand G 2890..2893 CDD:409353
IG_like 2916..2993 CDD:214653
Ig strand C 2940..2944 CDD:409353
Ig strand E 2959..2963 CDD:409353
Ig strand F 2973..2978 CDD:409353
IG_like 3016..3093 CDD:214653 4/16 (25%)
Ig strand B 3027..3031 CDD:409353
Ig strand C 3040..3044 CDD:409353
Ig strand E 3059..3063 CDD:409353
Ig strand F 3073..3078 CDD:409353
Ig strand G 3086..3089 CDD:409353 0/2 (0%)
IG_like 3115..3192 CDD:214653 22/92 (24%)
Ig strand B 3125..3129 CDD:409353 0/3 (0%)
Ig strand C 3138..3142 CDD:409353 1/3 (33%)
Ig strand E 3158..3161 CDD:409353 1/2 (50%)
Ig strand F 3171..3176 CDD:409353 2/4 (50%)
Ig strand G 3184..3188 CDD:409353 0/3 (0%)
Ig 3205..3291 CDD:472250 23/96 (24%)
Ig strand B 3222..3226 CDD:409353 1/3 (33%)
Ig strand C 3235..3240 CDD:409353 1/4 (25%)
Ig strand E 3257..3261 CDD:409353 0/3 (0%)
Ig strand F 3271..3276 CDD:409353 2/4 (50%)
Ig strand G 3284..3287 CDD:409353 2/5 (40%)
IG_like 3303..3385 CDD:214653 27/89 (30%)
Ig strand B 3313..3317 CDD:409353 3/3 (100%)
Ig strand C 3326..3330 CDD:409353 0/3 (0%)
Ig strand E 3351..3355 CDD:409353 1/3 (33%)
Ig strand F 3365..3370 CDD:409353 3/4 (75%)
Ig 3404..3478 CDD:472250 17/94 (18%)
Ig strand B 3412..3416 CDD:409353 1/3 (33%)
Ig strand C 3425..3429 CDD:409353 1/3 (33%)
Ig strand E 3444..3448 CDD:409353 1/3 (33%)
Ig strand F 3458..3463 CDD:409353 0/4 (0%)
Ig strand G 3471..3474 CDD:409353 0/2 (0%)
I-set 3482..3565 CDD:400151 19/88 (22%)
Ig strand B 3499..3503 CDD:409353 0/3 (0%)
Ig strand C 3512..3516 CDD:409353 2/16 (13%)
Ig strand E 3531..3535 CDD:409353 1/7 (14%)
Ig strand F 3545..3550 CDD:409353 1/4 (25%)
Ig 3588..3666 CDD:472250
Ig strand B 3600..3604 CDD:409353
Ig strand C 3613..3617 CDD:409353
Ig strand E 3632..3636 CDD:409353
Ig strand F 3646..3651 CDD:409353
Ig strand G 3659..3662 CDD:409353
Ig 3676..3755 CDD:472250
Ig strand B 3689..3693 CDD:409353
Ig strand C 3702..3706 CDD:409353
Ig strand E 3721..3725 CDD:409353
Ig strand F 3735..3740 CDD:409353
I-set 3764..3841 CDD:400151
Ig strand B 3775..3779 CDD:409353
Ig strand C 3788..3792 CDD:409353
Ig strand E 3807..3811 CDD:409353
Ig strand F 3821..3826 CDD:409353
Blue background indicates that the domain is not in the aligned region.

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