DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-lambda and Vsig10

DIOPT Version :9

Sequence 1:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001258265.1 Gene:Vsig10 / 304529 RGDID:1565800 Length:564 Species:Rattus norvegicus


Alignment Length:336 Identity:78/336 - (23%)
Similarity:130/336 - (38%) Gaps:71/336 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 AHIHGKGESEEIDPQFLAKLSNTTV--PIGRDISFTCVVDNLGHYRVAWIKSDSKAILGIHTH-- 97
            |||       :::......|.|.|:  ..|..:.|:|.........|.|         .|.||  
  Rat   150 AHI-------DVNISATGTLPNGTLYAARGSQVDFSCCSAAQPPPEVEW---------WIQTHSS 198

  Fly    98 -MVSLNPRLSVTHNGHNTWKLHISRVQINDSGSYMC---QVNTDPMKSLSGYLDVVVPPDILNHP 158
             ..||...||.     |::.|.:  :..|..|:|.|   .|.:...:.::..|.|..||.  :.|
  Rat   199 VSESLGKNLSA-----NSFTLML--MSKNLQGNYTCSATNVLSRRQRKVTTELLVYWPPP--SAP 254

  Fly   159 EHNPEDGVCQEGGSISLMCSVT-GVPRPKVLWRREAGKEIILRTDGRDKTGFKSVEGERLVLTNV 222
            :.:.  |:..|..::.|.|:.. |.|.|..||..|.|..::    |..|.         ..|:..
  Rat   255 QCSA--GLSPESANLELTCNWDGGYPDPTFLWTEEPGGVVV----GNSKL---------QTLSPS 304

  Fly   223 QRSDMGGYNCIASNGIPPSVSKRFNVYVNFSPTVKAISQ---LVGAPVEREVTLECIVEVFPKPL 284
            |.|:...:.|:.|:.:.|.......|.:: ||.:.:...   |||.    :|||.|.||....|.
  Rat   305 QLSEGKKFKCVGSHILGPESGASCVVQIS-SPLLASRPMKTCLVGG----DVTLTCQVEGANPPA 364

  Fly   285 N-GWYR--SEGNIKLHNGNKYNISEEVINIYTWHLNLTIRHLTK-SDFGTYSCSSVNALGKSESL 345
            . .|.|  ::....:...::|.|:::     ....:|||.:.:: .|.|.|.|.:.|.:|     
  Rat   365 RIQWLRNLTQPETAIQPSSRYVITQQ-----GQSSSLTIHNCSQDQDGGFYFCRAENPVG----- 419

  Fly   346 IRLQELRLPPK 356
            :|..::.|..|
  Rat   420 VRAADIWLSVK 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-lambdaNP_001334747.1 None
Vsig10NP_001258265.1 Ig 60..146 CDD:299845
IG_like 60..145 CDD:214653
IG_like 165..246 CDD:214653 21/96 (22%)
Ig 175..241 CDD:143165 18/81 (22%)
Ig_3 255..318 CDD:290638 17/77 (22%)
IG_like 347..429 CDD:214653 24/95 (25%)
Ig 351..426 CDD:143165 21/84 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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