DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-lambda and Lsamp

DIOPT Version :9

Sequence 1:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_030104997.1 Gene:Lsamp / 268890 MGIID:1261760 Length:392 Species:Mus musculus


Alignment Length:351 Identity:107/351 - (30%)
Similarity:159/351 - (45%) Gaps:40/351 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KGESEEIDP----QFLAKLSNTTVPIGRDISFTCVVDNLGHYRVAWIKSDSKAILGIHTHMVSLN 102
            |.:.||..|    .|.....|.||..|......|||:: .:.:|||: :.|..|...|... ||:
Mouse    51 KAKEEEGLPVRSVDFNRGTDNITVRQGDTAILRCVVED-KNSKVAWL-NRSGIIFAGHDKW-SLD 112

  Fly   103 PRLSVTHNGHNTWKLHISRVQINDSGSYMCQVNT--DPMKSLSGYLDVVVPPDILNHPEHNPEDG 165
            ||:.:.......:.|.|.:|.:.|.|||.|.|.|  :| |:...||.|.|||.|.|    ...|.
Mouse   113 PRVELEKRHALEYSLRIQKVDVYDEGSYTCSVQTQHEP-KTSQVYLIVQVPPKISN----ISSDV 172

  Fly   166 VCQEGGSISLMCSVTGVPRPKVLWRREAGKEIILRTDGRDKTGFKSVEGERLVLTNVQRSDMGGY 230
            ...||.:::|:|...|.|.|.:.||.       |...||:..|    |.|.|.:..:.|...|.|
Mouse   173 TVNEGSNVTLVCMANGRPEPVITWRH-------LTPLGREFEG----EEEYLEILGITREQSGKY 226

  Fly   231 NCIASNGIPPSVSKRFNVYVNFSPTVKAISQLVGAPVEREVTLECIVEVFPKPLNGWYRSEGNIK 295
            .|.|:|.:..:..|:..|.||:.||:.. |:...|...|:.:|:|.....|.|...|||.:..|.
Mouse   227 ECKAANEVSSADVKQVKVTVNYPPTITE-SKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRIN 290

  Fly   296 LHNGNKYNISEEVINIYTWHLNLTIRHLTKSDFGTYSCSSVNALGKSESLIRLQELRLPPKLTTT 360
            ..||.:...:|       ...:||:.::|:..:|.|:|.:.|.||.:.:.:.|.:..||    |.
Mouse   291 SANGLEIKSTE-------GQSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLFKRVLP----TV 344

  Fly   361 PTP--HMQTTGKSRRKHPASHKKGLN 384
            |.|  .:.||...:.|.|.| .:|:|
Mouse   345 PHPIQEIGTTVHFKPKGPGS-VRGIN 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-lambdaNP_001334747.1 None
LsampXP_030104997.1 Ig 69..159 CDD:386229 31/93 (33%)
Ig_3 163..232 CDD:372822 25/83 (30%)
Ig_3 250..325 CDD:372822 22/82 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I12107
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 142 1.000 Inparanoid score I4449
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - mtm8732
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.970

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