DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-lambda and Lsamp

DIOPT Version :10

Sequence 1:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_030104997.1 Gene:Lsamp / 268890 MGIID:1261760 Length:392 Species:Mus musculus


Alignment Length:351 Identity:107/351 - (30%)
Similarity:159/351 - (45%) Gaps:40/351 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KGESEEIDP----QFLAKLSNTTVPIGRDISFTCVVDNLGHYRVAWIKSDSKAILGIHTHMVSLN 102
            |.:.||..|    .|.....|.||..|......|||:: .:.:|||: :.|..|...|... ||:
Mouse    51 KAKEEEGLPVRSVDFNRGTDNITVRQGDTAILRCVVED-KNSKVAWL-NRSGIIFAGHDKW-SLD 112

  Fly   103 PRLSVTHNGHNTWKLHISRVQINDSGSYMCQVNT--DPMKSLSGYLDVVVPPDILNHPEHNPEDG 165
            ||:.:.......:.|.|.:|.:.|.|||.|.|.|  :| |:...||.|.|||.|.|    ...|.
Mouse   113 PRVELEKRHALEYSLRIQKVDVYDEGSYTCSVQTQHEP-KTSQVYLIVQVPPKISN----ISSDV 172

  Fly   166 VCQEGGSISLMCSVTGVPRPKVLWRREAGKEIILRTDGRDKTGFKSVEGERLVLTNVQRSDMGGY 230
            ...||.:::|:|...|.|.|.:.||.       |...||:..|    |.|.|.:..:.|...|.|
Mouse   173 TVNEGSNVTLVCMANGRPEPVITWRH-------LTPLGREFEG----EEEYLEILGITREQSGKY 226

  Fly   231 NCIASNGIPPSVSKRFNVYVNFSPTVKAISQLVGAPVEREVTLECIVEVFPKPLNGWYRSEGNIK 295
            .|.|:|.:..:..|:..|.||:.||:.. |:...|...|:.:|:|.....|.|...|||.:..|.
Mouse   227 ECKAANEVSSADVKQVKVTVNYPPTITE-SKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRIN 290

  Fly   296 LHNGNKYNISEEVINIYTWHLNLTIRHLTKSDFGTYSCSSVNALGKSESLIRLQELRLPPKLTTT 360
            ..||.:...:|       ...:||:.::|:..:|.|:|.:.|.||.:.:.:.|.:..||    |.
Mouse   291 SANGLEIKSTE-------GQSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLFKRVLP----TV 344

  Fly   361 PTP--HMQTTGKSRRKHPASHKKGLN 384
            |.|  .:.||...:.|.|.| .:|:|
Mouse   345 PHPIQEIGTTVHFKPKGPGS-VRGIN 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-lambdaNP_001334747.1 IG_like 57..150 CDD:214653 32/94 (34%)
Ig strand B 67..71 CDD:409353 0/3 (0%)
Ig strand E 115..119 CDD:409353 1/3 (33%)
Ig strand F 129..134 CDD:409353 3/4 (75%)
Ig 153..250 CDD:472250 27/96 (28%)
Ig strand B 173..177 CDD:409353 1/3 (33%)
Ig strand C 186..190 CDD:409353 0/3 (0%)
Ig strand E 204..219 CDD:409353 5/14 (36%)
Ig strand F 229..234 CDD:409353 2/4 (50%)
Ig strand G 243..246 CDD:409353 1/2 (50%)
IG_like 271..349 CDD:214653 20/77 (26%)
Ig strand B 271..275 CDD:409353 1/3 (33%)
Ig strand C 284..288 CDD:409353 0/3 (0%)
Ig strand E 308..320 CDD:409353 1/11 (9%)
Ig strand F 330..335 CDD:409353 2/4 (50%)
LsampXP_030104997.1 Ig 69..159 CDD:472250 31/93 (33%)
Ig strand B 80..84 CDD:409353 0/3 (0%)
Ig strand C 92..96 CDD:409353 2/3 (67%)
Ig strand E 125..129 CDD:409353 1/3 (33%)
Ig strand F 139..144 CDD:409353 3/4 (75%)
Ig strand G 152..155 CDD:409353 0/2 (0%)
Ig_3 162..232 CDD:464046 26/84 (31%)
Ig_3 249..325 CDD:464046 22/83 (27%)

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