DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-lambda and rig-5

DIOPT Version :9

Sequence 1:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001251131.1 Gene:rig-5 / 172791 WormBaseID:WBGene00004372 Length:482 Species:Caenorhabditis elegans


Alignment Length:501 Identity:141/501 - (28%)
Similarity:212/501 - (42%) Gaps:92/501 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KMYNGTLACSIAFILIKAITITKCHAVAHIHGKGESEEIDPQFLAKLSNTTVPIGRDISFTCVVD 74
            |||...|.|.:..:..:|.:            :|....|..   ..:|:....:|:|:.|||:|:
 Worm    60 KMYLFALLCGVLLVFKQACS------------RGAPPTIQQ---PSMSSAVALLGQDVDFTCIVN 109

  Fly    75 NLGHYRVAWIKSDSKAILGIHTHMV-------SLNPRLSVTHNGHNTWKLHISRVQINDSGSYMC 132
            :||.:.||::|:||...|......|       .|.||:.   :.||.|.|.|..||.:|.|:|.|
 Worm   110 DLGSHMVAFVKADSPPRLLSFDEKVFRRRNKYELKPRIG---DLHNEWVLTIKNVQESDRGNYSC 171

  Fly   133 QVNTDPMKSLSGYLDVVVPPDILNHPEHNPEDGVCQEGGSISLMCSVTGVPRPKVLWRREAGKEI 197
            |:||:|:...:|.|||.|||.:   ....|.....:||.::||.|...|.|.|.|:|||:..:  
 Worm   172 QINTEPITLSTGELDVKVPPVV---SRSTPAAVEVREGNNVSLTCKADGNPTPTVIWRRQDRQ-- 231

  Fly   198 ILRTDGRDKTGFKSVEGERLVLTNVQRSDMGGYNCIASNGIPPSVSKRFNVYVNFSPTVKAISQL 262
            |:|.:|....|.....|..|.||.|.|..|..|.|:|||||||..|....:.|.|.|.|:|.|:.
 Worm   232 IIRYNGATGFGASVFHGPVLHLTKVSRKHMSEYLCVASNGIPPDESWTVKLLVTFPPLVQAQSET 296

  Fly   263 VGAPVEREVTLECIVEVFPKPLNGWYRSEGNIKLHNGNKYNISEEVINIY-TWHLNLTIRHLTKS 326
            |.|.|.....:.|..|.:|:|..|| ..:|. .::..|...::..|...| :.|: |.||::..|
 Worm   297 VQASVGSMARMVCTTEAWPRPEMGW-EKDGE-PVYESNNVAMTHTVSGQYHSVHI-LEIRNVQSS 358

  Fly   327 DFGTYSCSSVNALGKSESLIRLQELRLPPKLTTTPTPHMQTTGKSRRKHPASHKKGLNEVLRFQE 391
            .||.|.|.:.|..|...|.:.|.::                          ||            
 Worm   359 HFGVYRCVAKNDNGIHHSQVTLNQI--------------------------SH------------ 385

  Fly   392 THFAN-QIQQENEDHNEGFDLLKFTNSENSNIVLESGHINSMINKEDVNIYHPKQ---YGQEKTN 452
            .||.| .:..|......|:......:.|..|:.      |...:.|:.:...|.|   |.|.:.:
 Worm   386 NHFTNSNLIPEGSGMPRGYSEDDEADEEEDNLE------NQKNDSEEEDSQSPPQLEFYSQARRH 444

  Fly   453 KPSGTIPSTRTPWILTNAGSQRPALTSYATVALITSFWLFFWRVFH 498
            : |...|:||:........|     .|:.::.|||..:.    |:|
 Worm   445 E-SRNAPTTRSELRAIQVDS-----ASFPSLLLITIIYF----VYH 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-lambdaNP_001334747.1 None
rig-5NP_001251131.1 IG_like 92..189 CDD:214653 38/99 (38%)
Ig_3 191..270 CDD:372822 28/83 (34%)
IG 294..380 CDD:214652 26/88 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I6913
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I2513
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - otm14489
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.070

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