DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-lambda and iglon5

DIOPT Version :9

Sequence 1:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_002938252.1 Gene:iglon5 / 100488314 XenbaseID:XB-GENE-945713 Length:333 Species:Xenopus tropicalis


Alignment Length:338 Identity:89/338 - (26%)
Similarity:145/338 - (42%) Gaps:58/338 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SIAFILIKAITITKCHAVAHIHGKGESEEIDPQFLAKLSNTTVPIGRDISFTCVVDNLGHYRVAW 83
            |:..:::..:...:|                .:|:....|.||..|.:.:.:|::|: ...||||
 Frog    12 SLGIVMLAQVLFVQC----------------TEFVPPADNYTVSQGDNATLSCLIDD-KVTRVAW 59

  Fly    84 IKSDSKAILGIHTHMVSLNPRLSVTHNGHNTWKLHISRVQINDSGSYMCQVNTDPMKSLSG-YLD 147
            :...:  ||.......|::.|:.:..|..:.:.:.|:.|.:.|.|.|.|...|:.....|. ||.
 Frog    60 LNRSN--ILYAGKDKWSIDSRVQLLTNTKSEYSIVITHVDVADEGLYTCSFQTEDKPHTSQVYLI 122

  Fly   148 VVVPPDILNHPEHNPEDGVCQEGGSISLMCSVTGVPRPKVLWRREAGKEIILRTDGRDKTGFKSV 212
            |.||..|:|    ........||.:::|.|...|.|.|.:.|::.:             .||.| 
 Frog   123 VQVPAKIVN----ISSSVTVNEGSNVNLQCLAVGKPEPTITWQQLS-------------EGFSS- 169

  Fly   213 EGERLVLTNVQRSDMGGYNCIASNGIPPSVSKRFNVYVNFSPTVKAISQLVGAPVEREVTLECIV 277
            |||.|.:|.:.|...|.|.|:.|||:....:|:..:.||:.|.:..:.. ..:||.|..||.|..
 Frog   170 EGELLEITEINRQQAGDYECVTSNGVSVPDTKKVQITVNYPPYITDVKN-AQSPVGRPATLRCKA 233

  Fly   278 EVFPKPLNGWYRSEGNIKLHNGNKYNISEEVINIYT---WHL----NLTIRHLTKSDFGTYSCSS 335
            ...|.....||:.|.. :|.:|.      |.::|.|   |.:    |:|.||     :|.|:|.:
 Frog   234 MAVPPAEFEWYKDEKR-RLISGT------EGLSIKTESSWSVIVFSNVTSRH-----YGNYTCLA 286

  Fly   336 VNALGKSESLIRL 348
            .|.||...|.:||
 Frog   287 SNKLGSFNSSLRL 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-lambdaNP_001334747.1 None
iglon5XP_002938252.1 Ig 31..123 CDD:299845 25/94 (27%)
IG_like 35..123 CDD:214653 25/90 (28%)
Ig 126..207 CDD:299845 27/98 (28%)
I-set 128..207 CDD:254352 26/96 (27%)
I-set 210..299 CDD:254352 28/101 (28%)
Ig 227..298 CDD:143165 24/82 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 58 1.000 Domainoid score I10578
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I4412
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

Return to query results.
Submit another query.