DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-lambda and chl1b

DIOPT Version :9

Sequence 1:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_017212175.2 Gene:chl1b / 100318566 ZFINID:ZDB-GENE-091105-1 Length:1294 Species:Danio rerio


Alignment Length:449 Identity:99/449 - (22%)
Similarity:172/449 - (38%) Gaps:93/449 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CSIAFILIKAITITKCHAVAHI-------------HGKGESE---EIDPQFLAKL---SNTTVPI 63
            |..||..|:  ||.:..|::.:             .|:|.:.   |..|..||..   |:|.:..
Zfish   213 CFAAFPRIR--TIVQKTAMSMVVKSNKLMKDSSSGSGRGYANSLLERKPSLLAPTGMESHTRLVK 275

  Fly    64 GRDISFTCVVDNLGHYRVAWIKSDSKAILGIHTHMVSLNPRLSVTHNGHNTWKLHISRVQINDSG 128
            |.|:...|:.:.....:|.|:|      :|.:    .|..|:.|..:|.   .|.:..|...|.|
Zfish   276 GEDLQLECIAEGFPTPKVEWVK------IGFN----KLPERVVVESHGK---LLTVEMVNEEDEG 327

  Fly   129 SYMCQVNTDPMKSLSGYLDVVV--PPDILNHPEHNPEDGVCQEGGSISLMCSVTGVPRPKVLWRR 191
            .|||:.. :|...:..:..|.|  ||:.    |..|:..:...|..:.:.|.|.|.|:|.|.||.
Zfish   328 KYMCRAK-NPHGEVVHHFHVTVEEPPEF----EIEPQSQLVTIGADVLIKCVVKGNPQPTVGWRV 387

  Fly   192 EAGKEIILRTDGRDKTGFKSVEGERLVLTNVQRSDMGGYNCIASNGIPPSVSKRFNVYVNFSPTV 256
            .......:.|..|     |.::...:.:.|....:...|.|.|:|.....::....:.:|..|.:
Zfish   388 NGRPLNEVPTSNR-----KILKDGTISIHNANPENSAVYQCEATNKHGTILANANIMIMNIQPLI 447

  Fly   257 KAISQLVGAPVE-REVTLECIVEVFPKPLNG--WYRSEGNIKLHNGNKYNISEEVINIYTWHLN- 317
            ...:.|....|| :.|.:.|  :||..|.:.  |.::: :.....|.::.:          |.| 
Zfish   448 LTENNLQYMAVEGKSVVMHC--KVFSSPASSITWSKAD-SANAVEGERFTV----------HQNG 499

  Fly   318 -LTIRHLTKSDFGTYSCSSVNALGKSESLIRLQELRLPPKLTTTPTPHMQTTGKSRRKHPASHKK 381
             |.|.::.|.|.|.|||.:.|..|| .::....|::.|.::...|                   :
Zfish   500 SLEIHNVMKEDMGEYSCFAQNTEGK-VAIAATLEVKDPTRIVDPP-------------------R 544

  Fly   382 GLNEVLRFQETHFANQIQQENEDHNEGFDLL------KFTNSENSNIVLESGHINSMIN 434
            .| .||......|:.| .:.:....:.|::|      ....||:...:||.| :..:||
Zfish   545 DL-RVLAGTTIQFSCQ-PEFDPSFGDDFEVLWEKDGIALNGSEDGRYILEDG-VLEIIN 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-lambdaNP_001334747.1 None
chl1bXP_017212175.2 Ig 61..135 CDD:325142
Ig 138..231 CDD:325142 7/19 (37%)
Ig 279..348 CDD:325142 18/82 (22%)
Ig 366..438 CDD:325142 17/76 (22%)
IG 454..533 CDD:214652 22/92 (24%)
I-set 538..628 CDD:333254 15/85 (18%)
FN3 632..722 CDD:238020
FN3 734..815 CDD:238020
FN3 832..931 CDD:238020
fn3 942..1022 CDD:306538
FN3 1070..1142 CDD:214495
Bravo_FIGEY 1196..1279 CDD:316405
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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