DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-lambda and vsig10

DIOPT Version :9

Sequence 1:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001093564.2 Gene:vsig10 / 100005564 ZFINID:ZDB-GENE-030131-7476 Length:529 Species:Danio rerio


Alignment Length:505 Identity:103/505 - (20%)
Similarity:172/505 - (34%) Gaps:143/505 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 TITKCHAVAHIHGKGESEEIDPQFLAKLSNTTVPI--GRDISFTCVVDNLGHYRVAWIKSDSKAI 91
            |::|..........|.|.:|.|...  |:|.|:.:  |.:::|:|..::.....:.|...     
Zfish   108 TLSKIQLTIAAGPTGVSLDISPATF--LNNGTLFVHKGSNVNFSCSSESNPSQNLTWTVD----- 165

  Fly    92 LGIHTHMVSLNPRLSVTHNGHNTWKLHISRVQINDSGSYMC-QVNTDPMKSLSGYLDVVV--PPD 153
                 ::.|.||...  ....:.....|:.:|..|.|:|.| ..||...::.:...:::|  .|:
Zfish   166 -----NLASDNPERE--FGSKSPLAFSITNIQPLDQGTYTCTSQNTLSRRTANKTQELLVYYAPE 223

  Fly   154 ILNHPEHNPEDGVCQEGGSISLMCS-VTGVPRPKVLWRR----EAGKEIILRTDGRDKTGFKSVE 213
              .|||.:.|.|  .:...:..:|| ..|.|.|.:.|:.    ..|..|.|.|.  .:|...:|.
Zfish   224 --RHPECSWELG--DKPSDVLFICSWFGGYPVPTLTWQEVEGAAEGPTINLTTS--QQTEELNVS 282

  Fly   214 GERLVLTNVQRSDMGGYNCIASNGIPPSVSKRFNV-YVNFSPTVKAISQLVGAPVEREVTLECI- 276
            ..|.:|.:..:....|::.   .|:..|.|....: |....|...|:.       ...:|:.|. 
Zfish   283 VNRSILHDGDKVKCTGHHV---TGVEKSCSFTLKIPYPTGQPLATALE-------GTNITISCTE 337

  Fly   277 VEVFPKPLNGWYRSEGNIKLHNGNKYNISEEVINIYTWHLNLTIRHLTKSDFGTYSCSSVNALGK 341
            ....|.....|.:::..|:  |.:||.:.|.     ...|.|||.::||:|.|.|.|.|.|.||.
Zfish   338 TSSLPPAKTVWKKNDDLIE--NTSKYIVQEN-----RPALTLTIVNVTKADEGVYYCYSENPLGA 395

  Fly   342 SESLIRLQELRLPPKLTTTPTPHMQTTGKSRRKHPASHKKGLNEV-------------------- 386
            .|..:.|..                       |..|.:...:..:                    
Zfish   396 RELEVYLNV-----------------------KTSAGNGGAIVGIFVSVLVMMIGIVVGVTVYTK 437

  Fly   387 -------LRFQETHFANQIQQENEDHNEGFDLLKFTNSENSNIVLE---------SGHINSMI-- 433
                   |||         .|.::|.   .|:|...:|:...|..|         :||..:::  
Zfish   438 RDRICIGLRF---------SQLDDDR---VDVLSLVDSDEEEIFHEAVPRLPPVTNGHATTLVEI 490

  Fly   434 ------NKEDVNIYHPKQYGQEKTNKPSGTIPSTRTPWILTNAGSQRPAL 477
                  :.||:               ...|..|.:|...||.||.||..|
Zfish   491 HRIPSCDHEDI---------------ADSTEQSDQTRANLTEAGPQRAEL 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-lambdaNP_001334747.1 None
vsig10NP_001093564.2 IG_like 28..116 CDD:214653 2/7 (29%)
Ig 32..104 CDD:299845
IG_like 140..204 CDD:214653 13/75 (17%)
IGc2 143..203 CDD:197706 13/71 (18%)
IG_like 324..404 CDD:214653 26/93 (28%)
Ig 328..404 CDD:299845 25/82 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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