DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB2 and Creld2

DIOPT Version :9

Sequence 1:NP_723857.1 Gene:NimB2 / 260645 FlyBaseID:FBgn0028543 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_083996.1 Gene:Creld2 / 76737 MGIID:1923987 Length:350 Species:Mus musculus


Alignment Length:228 Identity:63/228 - (27%)
Similarity:85/228 - (37%) Gaps:79/228 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 IQVCCDGYERNPHIYRRCEPICADDCR---------NGICTAPNTCVCIPGHVRTAEGKCISTCP 219
            ::.||     .|..|   .|.| .:|:         ||.|:...:        |..:|.|  .|.
Mouse   122 LKACC-----LPGTY---GPDC-QECQGGSERPCSGNGYCSGDGS--------RQGDGSC--QCH 167

  Fly   220 LGCGNGVCDERNECKCREG-YSLE-PETRKYCQPECKPGCSFGRCVAPN-----KC--------- 268
            .|....:|.:     |.:| :||: .||...|. .|...|.  .|..|:     :|         
Mouse   168 TGYKGPLCID-----CTDGFFSLQRNETHSICS-ACDESCK--TCSGPSNKDCIQCEVGWARVED 224

  Fly   269 ACLDGYRLAADGS-------CEPV-----CDSCENG--KCTAPGHCNCN---AGYLKLQGRCEPI 316
            ||:|....||:.|       ||.|     |:.|::.  .||..|..||.   |||.|..|:|..|
Mouse   225 ACVDVDECAAETSPCSDGQYCENVNGSYTCEDCDSTCVGCTGKGPANCKECIAGYTKESGQCTDI 289

  Fly   317 --CSI---PC--KNGRCI---GPDICECASGFE 339
              ||:   .|  ||..|.   |..:|.|..|||
Mouse   290 DECSLEEKACKRKNENCYNVPGSFVCVCPEGFE 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB2NP_723857.1 None
Creld2NP_083996.1 CXXC. /evidence=ECO:0000305|PubMed:23956175 29..32
FU 1 191..238 11/49 (22%)
FU 196..246 CDD:238021 11/51 (22%)
FU 2 251..298 16/46 (35%)
FU 253..288 CDD:214589 13/34 (38%)
CXXC. /evidence=ECO:0000305|PubMed:23956175 261..264 0/2 (0%)
vWFA <286..326 CDD:381780 14/37 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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