DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB2 and NimB3

DIOPT Version :9

Sequence 1:NP_723857.1 Gene:NimB2 / 260645 FlyBaseID:FBgn0028543 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster


Alignment Length:108 Identity:36/108 - (33%)
Similarity:52/108 - (48%) Gaps:25/108 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 VQPVTPPAHRVQVLDETALFINKTRSAMASGVCYKEVPTASLLRNSRDQFVGNGTTPDMSRIQVC 167
            |.|||  ..|.:.|.|           ..||:||:.:...::..|||::           :...|
  Fly    30 VDPVT--QWRKEALAE-----------RGSGICYRTLTVETINPNSRNR-----------QFSYC 70

  Fly   168 CDGY-ERNPHIYRRCEPICADDCRNGICTAPNTCVCIPGHVRT 209
            |||| .:......:|||||::||.||:|.||..|.|.||:.|:
  Fly    71 CDGYVNKGTSQNLKCEPICSEDCSNGLCLAPEECECAPGYYRS 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB2NP_723857.1 None
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 23/67 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D97941at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.820

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