DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB2 and Scarf1

DIOPT Version :9

Sequence 1:NP_723857.1 Gene:NimB2 / 260645 FlyBaseID:FBgn0028543 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001004157.2 Gene:Scarf1 / 380713 MGIID:2449455 Length:820 Species:Mus musculus


Alignment Length:415 Identity:103/415 - (24%)
Similarity:126/415 - (30%) Gaps:176/415 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 QFVGNGTTPDMSRIQVCCDGYERNPHIYRRCE-PIC--ADDCR-NGICTAPNTCVCIPG------ 205
            |.|..|::|  |.:| ||.|:.:..   :.|. |||  .|.|| ..:|..|..|.|.||      
Mouse    31 QHVCKGSSP--SELQ-CCPGWRQKD---QECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQC 89

  Fly   206 -------------------HVR----TAEGKC---------ISTCPLGCG-NGVCDERNE-CKCR 236
                               |.|    .|.|.|         :...|..|| :|.||.:.. |.|.
Mouse    90 SSRCPGQYWGHDCRETCPCHPRGQCEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCD 154

  Fly   237 EGYSLEPETRKYCQPE-------------CKPG-----CSF-------------GRCV------- 263
            .|: ..|..|:.||..             |.||     |||             ||||       
Mouse   155 PGW-WSPTCRRPCQCNPASRCDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWG 218

  Fly   264 --APNKCACLDGYRLAADGSCEPVCDSCENG----KCTAP--------------GHCNCNAGYLK 308
              ...||.|:.|......|.|     ||..|    :|..|              |||..||....
Mouse   219 PECSRKCQCVRGQCSVTSGHC-----SCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSP 278

  Fly   309 LQGRCEPI--------CSIPCKNG----RCIGP-------DICECASGFEWDRKSAECLP----- 349
            :.|.||..        |..||..|    ||.|.       :.|:..:|     ....|.|     
Mouse   279 VTGNCESCKPGWNGTQCKQPCPAGTFGERCTGQCPRCRLGEPCQAETG-----HCQHCDPGWLGH 338

  Fly   350 KCDLP----------------CLNGVC-VGNNQCDCKTGYVRDEHQRNICQPHCPQGCQNGYCSA 397
            :|:.|                |..|.| ....:|.|..||     ....|...||.|.....||.
Mouse   339 RCENPCPLGTFGKGCSSTCPACAQGTCDAVTGECVCSAGY-----WGTSCNSSCPAGFHGNNCSM 398

  Fly   398 PNFC---ICRPGFIKSGIKGRQTCQ 419
            |..|   :|.|      :.|  |||
Mouse   399 PCQCPEGLCHP------VSG--TCQ 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB2NP_723857.1 None
Scarf1NP_001004157.2 PHA03247 <541..781 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 549..685
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..820
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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