DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB2 and TNC

DIOPT Version :9

Sequence 1:NP_723857.1 Gene:NimB2 / 260645 FlyBaseID:FBgn0028543 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_016870167.1 Gene:TNC / 3371 HGNCID:5318 Length:2384 Species:Homo sapiens


Alignment Length:465 Identity:116/465 - (24%)
Similarity:157/465 - (33%) Gaps:178/465 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CSLGQGQFKTAGIKTRQPPSGNLQLAGNSSESGWRSYNQS---------------------SYGW 61
            || |:|.|.|.|             .|...|.||:..|.|                     ..|:
Human   161 CS-GRGNFSTEG-------------CGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICDDGF 211

  Fly    62 STQNQSNYA----WNQQNHVEQGSA----GFVRAEVFQPVTLPPLYGHYVQPVTPPAHRVQVLDE 118
            :.::.|..|    .|.|.....|..    |:..|:..:.:...|                     
Human   212 TGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCSREICPVP--------------------- 255

  Fly   119 TALFINKTRSAMASGVCYKEVPTASLLRNSRDQFVGNGTTPDMSRIQVCCDGYERNPHIYRRC-E 182
                            |.:|                :||..|  .:.||.||:..:.     | :
Human   256 ----------------CSEE----------------HGTCVD--GLCVCHDGFAGDD-----CNK 281

  Fly   183 PICADDCRN-GICTAPNTCVCIPGHVRTAE--------------GKCIS---------------- 216
            |:|.::|.| |.| ..|.|||..|.  |.|              |:||:                
Human   282 PLCLNNCYNRGRC-VENECVCDEGF--TGEDCSELICPNDCFDRGRCINGTCYCEEGFTGEDCGK 343

  Fly   217 -TCPLGC-GNGVCDERNECKCREGYSLEPETRKYCQPECKPGCSFGRCVAPNKCACLDGYRLAAD 279
             |||..| ..|.|:| .:|.|.||::....:.|.|..:|.   :.|||| ..:|.|.||:..|..
Human   344 PTCPHACHTQGRCEE-GQCVCDEGFAGVDCSEKRCPADCH---NRGRCV-DGRCECDDGFTGADC 403

  Fly   280 G--SCEPVCDSCENGKCTAPGHCNCNAGYLK---LQGRCEPICSIPCKNGRCIGPDICECASGFE 339
            |  .|...|..  :|:| ..|.|.|:.||..   .|.||...|.   ..|||: ...|.|..|| 
Human   404 GELKCPNGCSG--HGRC-VNGQCVCDEGYTGEDCSQLRCPNDCH---SRGRCV-EGKCVCEQGF- 460

  Fly   340 WDRKSAECLPKCDLPCLN-----GVCVGNNQCDCKTGYVRDEHQRNICQP-HCPQGCQN-GYCSA 397
               |..:|   .|:.|.|     |.|| |..|.|..||..::     |:. .||:.|.| |.| .
Human   461 ---KGYDC---SDMSCPNDCHQHGRCV-NGMCVCDDGYTGED-----CRDRQCPRDCSNRGLC-V 512

  Fly   398 PNFCICRPGF 407
            ...|:|..||
Human   513 DGQCVCEDGF 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB2NP_723857.1 None
TNCXP_016870167.1 EGF_2 377..403 CDD:285248 11/29 (38%)
EGF_2 408..434 CDD:285248 9/28 (32%)
EGF_2 468..496 CDD:285248 10/33 (30%)
EGF_2 504..527 CDD:285248 8/20 (40%)
EGF_2 533..558 CDD:285248
fn3 624..695 CDD:306538
fn3 713..793 CDD:306538
fn3 804..884 CDD:306538
fn3 894..976 CDD:306538
fn3 986..1064 CDD:306538
fn3 1075..1154 CDD:306538
fn3 1169..1241 CDD:306538
fn3 1260..1327 CDD:306538
fn3 1348..1427 CDD:306538
fn3 1439..1508 CDD:306538
fn3 1533..1605 CDD:306538
fn3 1619..1691 CDD:306538
fn3 1716..1788 CDD:306538
fn3 1804..1883 CDD:306538
fn3 1894..1973 CDD:306538
fn3 1985..2055 CDD:306538
fn3 2071..2143 CDD:306538
Fibrinogen_C 2163..2372 CDD:278572
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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