DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB2 and Dkk1

DIOPT Version :9

Sequence 1:NP_723857.1 Gene:NimB2 / 260645 FlyBaseID:FBgn0028543 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001099820.1 Gene:Dkk1 / 293897 RGDID:1307313 Length:270 Species:Rattus norvegicus


Alignment Length:207 Identity:44/207 - (21%)
Similarity:62/207 - (29%) Gaps:80/207 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 KPGCSFGRCVAP-------NKCACLDGYR---LAADGSC--EPVCDSCENGKCTAPGHCNCNAGY 306
            :||.:..  |||       ||...||.|:   .|.|..|  :..|.|...|.....|...|.|  
  Rat    56 QPGSAVS--VAPGVLYEGGNKYQTLDNYQPYPCAEDEECGTDEYCSSPSRGAAGVGGVQICLA-- 116

  Fly   307 LKLQGRCEPICSIPCKNGRCIGPDICECASGFEWDRKSAECLPKCDLPCLNGVCVGNNQCDCKTG 371
                  |..      :..||:...:| |...:                |.||:|:.::......|
  Rat   117 ------CRK------RRKRCMRHAMC-CPGNY----------------CKNGICMPSDHSHLPRG 152

  Fly   372 YVRDEHQRNICQPH--------------------------C--PQGCQNGYCSAPNFC--ICRPG 406
            .:.:....|:...|                          |  ...|..|.|.|.:|.  ||:| 
  Rat   153 EIEEGIIENLGNDHGAGDGYPRRTTLTSKIYHTKGQEGSVCLRSSDCATGLCCARHFWSKICKP- 216

  Fly   407 FIKSGIKGRQTC 418
            .:|.|    |.|
  Rat   217 VLKEG----QVC 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB2NP_723857.1 None
Dkk1NP_001099820.1 Dickkopf_N 86..142 CDD:398399 17/86 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.