DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB2 and Megf10

DIOPT Version :9

Sequence 1:NP_723857.1 Gene:NimB2 / 260645 FlyBaseID:FBgn0028543 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001094127.1 Gene:Megf10 / 291445 RGDID:735084 Length:1145 Species:Rattus norvegicus


Alignment Length:521 Identity:124/521 - (23%)
Similarity:163/521 - (31%) Gaps:207/521 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SSSCQLVTLGVLLAICSLGQGQFKTAGIKTRQPPSGNLQLAGNSSESGWRSYNQSSYGWSTQNQS 67
            ||||    ||:   ||||.....:.|         .:|.|...:..|.|.||:            
  Rat     5 SSSC----LGL---ICSLLCHWLRAA---------SSLNLEDPNVCSHWESYS------------ 41

  Fly    68 NYAWNQQNHVEQGSAGFVRAEVFQPVTLPPLYGHYVQPVTPPAHRVQVLDETAL--FINKTRSAM 130
                                     ||:...|.|       |..::.....|.:  :...||..:
  Rat    42 -------------------------VTVQESYPH-------PFDQIYYTSCTDILNWFKCTRHRV 74

  Fly   131 ASGVCYKEVPTASLLRNSRDQFVGNGTTPDMSRIQVCCDGYERNPHIYRRCEPICADDCRNGICT 195
            :....|:........|.|:                 ||.|:..:..:   |.|.|||.|.:|.|.
  Rat    75 SYRTAYRHGEKTMYRRKSQ-----------------CCPGFYESRDV---CVPHCADKCVHGRCI 119

  Fly   196 APNTCVCIPGHVRT------------------------------------AEG----KCISTCPL 220
            |||||.|.||...|                                    |.|    :|...|..
  Rat   120 APNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNRALCNPITGACHCAAGYRGWRCEDRCEQ 184

  Fly   221 G-----------CGNG-VCDE-RNECKCREGYSLEPETRKYCQPECKPG-----CSFGRCVAPN- 266
            |           |.|| .||. ..||:|..||     |..:|:..|.||     |. .||...| 
  Rat   185 GTYGNDCHQRCQCQNGATCDHITGECRCSPGY-----TGAFCEDLCPPGKHGPQCE-QRCPCQNG 243

  Fly   267 --------KCACLDGYRLAADG----------SCEPVCDSCENGKC-TAPGHCNCNAGYL--KLQ 310
                    :|:|..|:.....|          :|...|.....|.| .|.|.|:|:.||.  :.|
  Rat   244 GVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGACDAATGQCHCSPGYTGERCQ 308

  Fly   311 GRCEPI------CSIPCK---NGRCIG-PDICECASGFEWDRKSAECLP------KCDLPCLNGV 359
            ..| |:      |:..|:   .|:|.. ...|.|.:||..:...|...|      |||..|   .
  Rat   309 DEC-PVGTYGVRCAETCRCVNGGKCYHVSGTCLCEAGFSGEFCEARLCPEGLYGIKCDKRC---P 369

  Fly   360 CVGNN---------QCDCKTGYVRDEHQRNICQP-----HCPQ--GCQNGY-C-SAPNFCICRPG 406
            |..:|         :|.||.|: ...:....|.|     .|.|  .||||. | |....|.|.||
  Rat   370 CHLDNTHSCHPMSGECGCKPGW-SGLYCNETCSPGFYGEACQQICSCQNGADCDSVSGRCACAPG 433

  Fly   407 F 407
            |
  Rat   434 F 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB2NP_723857.1 None
Megf10NP_001094127.1 EMI 32..99 CDD:400092 18/127 (14%)
EGF_Lam 281..318 CDD:214543 12/37 (32%)
EGF_CA 542..587 CDD:419698
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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