DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB2 and Tnr

DIOPT Version :9

Sequence 1:NP_723857.1 Gene:NimB2 / 260645 FlyBaseID:FBgn0028543 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_071707.2 Gene:Tnr / 21960 MGIID:99516 Length:1358 Species:Mus musculus


Alignment Length:404 Identity:98/404 - (24%)
Similarity:137/404 - (33%) Gaps:147/404 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ESGWRSYNQSSYGWSTQNQS---NYAWNQQNHVEQGSAGFVRAEVFQPVTLPPLYGHYVQPVTPP 109
            |.|..|||.||     :.|.   |:.:|....:|...:..:.|...|.::...            
Mouse    48 EGGASSYNTSS-----KEQPMVFNHVYNINVPLESLCSSGLEASAEQDMSAED------------ 95

  Fly   110 AHRVQVLDETALFINKTRSAMASGVCY--------KEVPTASLLRNSRDQFVGNGTTPDMSRIQV 166
                   |..|.:|.:| |...|.|.:        |..|.||..:..::.         :|||::
Mouse    96 -------DTLAEYIGQT-SDHESQVTFTHKINLPKKACPCASSSQVLQEL---------LSRIEM 143

  Fly   167 CCDGYERNPHIYRRCEPICADDCRNGICTAPNTCVCIPGHVRTAEGKCISTCPLGCGNGVCDERN 231
                .||...:.|       |.|....|..         ...|.:...:..|. |.|| ...|..
Mouse   144 ----LEREVSLLR-------DQCNTNCCQE---------SAATGQLDYVPHCS-GHGN-FSFESC 186

  Fly   232 ECKCREGYSLEPETRKYC-QPECKPGCSF-GRCVAPNKCACLDGYRLAADGSCEPVCDS------ 288
            .|.|.||:     ..|.| :|.|..|||. |.||               ||.|  :|||      
Mouse   187 GCICNEGW-----FGKNCSEPYCPLGCSSRGVCV---------------DGQC--ICDSEYSGDD 229

  Fly   289 CENGKCTAPGHCNCNAGYLKLQGRC---EPICSIPCKNGRCIGPDICECASGFEWDRKSAECLPK 350
            |...:|..    :|::..|.:.|.|   ||.....|:..||.|                 :|..|
Mouse   230 CSELRCPT----DCSSRGLCVDGECVCEEPYTGEDCRELRCPG-----------------DCSGK 273

  Fly   351 CDLPCLNGVCVGNNQCDCKTGYV-RDEHQR---NIC--QPHCPQG---CQNGY----CSAPNFCI 402
            ..  |.||.|:      |:.||. .|..||   |.|  :.||.:|   |:.||    |||    :
Mouse   274 GQ--CANGTCL------CQEGYAGEDCSQRRCLNACSGRGHCQEGLCICEEGYQGPDCSA----V 326

  Fly   403 CRPGFIK-SGIKGR 415
            ..|..:: :||..|
Mouse   327 APPEDLRVAGISDR 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB2NP_723857.1 None
TnrNP_071707.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..58 5/9 (56%)
exchanger_TraA <190..>328 CDD:411343 54/192 (28%)
EGF_Tenascin 203..231 CDD:376143 13/44 (30%)
fn3 328..398 CDD:394996 4/13 (31%)
fn3 416..496 CDD:394996
fn3 507..586 CDD:394996
FN3 595..679 CDD:238020
fn3 687..766 CDD:394996
fn3 776..855 CDD:394996
fn3 865..944 CDD:394996
fn3 954..1026 CDD:394996
FN3 1042..1127 CDD:238020
FBG 1134..1343 CDD:214548
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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