DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB2 and lag-2

DIOPT Version :9

Sequence 1:NP_723857.1 Gene:NimB2 / 260645 FlyBaseID:FBgn0028543 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_503877.1 Gene:lag-2 / 178755 WormBaseID:WBGene00002246 Length:402 Species:Caenorhabditis elegans


Alignment Length:161 Identity:39/161 - (24%)
Similarity:54/161 - (33%) Gaps:66/161 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 CEPVCDS----CENGKCTAPGHCNCNAGYLKLQGRCEPICSIPCKNGRCIGPDICECASGFEWDR 342
            ||..||:    ....:|.|.|...|:.|::      .|.|      |:.:.|..|.|.:      
 Worm   133 CENFCDAHLAKAARKRCDAMGRLRCDIGWM------GPHC------GQAVDPRKCSCEN------ 179

  Fly   343 KSAECLPKCDLPCLNGVCVGN-------NQ--------CDCKTGY--VRDE----HQRNICQPH- 385
                          :|:||.:       ||        |:|..|:  .|.|    :|..:..|. 
 Worm   180 --------------DGICVSSMIHPSQPNQTSSNEQLICECTNGFTGTRCEIFGFNQFQLTAPRP 230

  Fly   386 --C--PQGCQNGYCSAPN----FCICRPGFI 408
              |  ...|.||....||    ||.|..|||
 Worm   231 DACSVKDACLNGAKCFPNGPKVFCSCAVGFI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB2NP_723857.1 None
lag-2NP_503877.1 DSL 103..166 CDD:128366 10/38 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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