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Protein Alignment PYDC1 and csp-1
DIOPT Version :9
Sequence 1: | NP_690865.1 |
Gene: | PYDC1 / 260434 |
HGNCID: | 30261 |
Length: | 89 |
Species: | Homo sapiens |
Sequence 2: | NP_001022452.1 |
Gene: | csp-1 / 175007 |
WormBaseID: | WBGene00000819 |
Length: | 536 |
Species: | Caenorhabditis elegans |
Alignment Length: | 24 |
Identity: | 8/24 - (33%) |
Similarity: | 14/24 - (58%) |
Gaps: | 0/24 - (0%) |
- Green bases have known domain annotations that are detailed below.
Human 47 LDIVDLTDKLVASYYEDYAAELVV 70
|||:..|.:.|.:.||:....:|:
Worm 493 LDILTETGRNVVTKYENVQGNVVL 516
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PYDC1 | NP_690865.1 |
Pyrin_ASC-like |
5..87 |
CDD:260033 |
8/24 (33%) |
csp-1 | NP_001022452.1 |
SPK |
76..188 |
CDD:214732 |
|
CASc |
285..533 |
CDD:214521 |
8/24 (33%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C161461425 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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