DRSC/TRiP Functional Genomics Resources

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Protein Alignment SETBP1 and set-8

DIOPT Version :9

Sequence 1:XP_024306917.1 Gene:SETBP1 / 26040 HGNCID:15573 Length:1622 Species:Homo sapiens
Sequence 2:NP_001359546.1 Gene:set-8 / 184086 WormBaseID:WBGene00008527 Length:407 Species:Caenorhabditis elegans


Alignment Length:127 Identity:31/127 - (24%)
Similarity:46/127 - (36%) Gaps:48/127 - (37%)


- Green bases have known domain annotations that are detailed below.


Human   642 EFPGTKKRKRRRNLAKLAQLVPGEDKPMSEMKFHKKVGKLGVL----------DKKTIKTINKMK 696
            |:...|::.||..|||:.     .||   |.||:....||.:|          |..::|.|..  
 Worm   283 EYISEKEKARRDALAKVC-----NDK---ECKFYSFQVKLELLNELQAQKVYVDGSSVKNITA-- 337

Human   697 TLKRKNILNQILSCSSSVALKAKAPPETSPGAAAIESKLGKQ------INVSKRGTIYIGKK 752
                  |||  .||              .|...||..::..|      |.:..:.||.:|::
 Worm   338 ------ILN--TSC--------------EPNCTAIVEEISIQNIRIEYIVIKTKRTIKVGEE 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SETBP1XP_024306917.1 None
set-8NP_001359546.1 SET <106..400 CDD:225491 31/127 (24%)
SET 251..389 CDD:214614 31/127 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161470052
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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