DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SETBP1 and set-19

DIOPT Version :9

Sequence 1:XP_024306917.1 Gene:SETBP1 / 26040 HGNCID:15573 Length:1622 Species:Homo sapiens
Sequence 2:NP_001379854.1 Gene:set-19 / 180834 WormBaseID:WBGene00020919 Length:953 Species:Caenorhabditis elegans


Alignment Length:650 Identity:124/650 - (19%)
Similarity:215/650 - (33%) Gaps:217/650 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    56 EPEEEDELGSGRDVDSNSNADSEKWVAGDGLEEQEFSIKEANFTEGSL----------KLKIQTT 110
            ||..|.|        ....|.....:|.:.:|.:   |:||:....:|          ||:....
 Worm   354 EPTPESE--------RCKRARDRSIIAAETIEAE---IEEAHEKRMALKARKAFLLKRKLRKSNV 407

Human   111 KRAKKPPKNLENYICPPEIKITIKQSGDQKVSRAGKNSKATKEEERSHSKKKGVTVTYSDLPSCV 175
            :|.:.|    ||...|    :....|.....:....:|..::.:.|..::..||..:.|      
 Worm   408 RRTESP----ENKRSP----VQSSSSSSSGSTEGNVSSLRSRSDVRKSTRLVGVRSSSS------ 458

Human   176 WHSAVIAEDCLGILLTASDLAASDLKGFQPQAYERPQKHSTLHYDTGLPQDFTGDTLKPKHQQKS 240
                         :..|::.|.|...||||        ||      |:.:     |||.:..::|
 Worm   459 -------------ISVATNHAQSQDPGFQP--------HS------GVTR-----TLKGRFCRQS 491

Human   241 S------------SQNHMDWSTNSDSGPVTQN-------------------------CFIS-PES 267
            .            :......||..|:..|.:|                         ||:. ..|
 Worm   492 GRIAVSRSLLQLRANKRRQQSTEGDASGVRKNEGLVARKERERKELMLFSKRSRPQTCFMGVKSS 556

Human   268 GRETASTS-------KIPAL--EPVASFAKAQGKK-GSAG--------------NTWSQLSNNNK 308
            ||:::.:|       :.|:|  .||.|....:|.. .|:|              .|..|.:....
 Worm   557 GRDSSMSSTTSSERERSPSLTESPVRSRNHVRGSSPQSSGLNERASRCRERVTRRTRLQTTPARV 621

Human   309 DLLLGGVAPSPS--SHSSP---APPS-----SSAECNGLQPLVDQDGGGTKEPPEPPTVGSKKKS 363
            .:.|..|:|.|:  ...||   :|.|     |.|.|:|..  |::|                 :|
 Worm   622 PVELESVSPIPARVRQRSPEVQSPKSEMRTRSRARCDGYD--VERD-----------------QS 667

Human   364 SKKDVISQTIPNPDLDWVKNAQKAFDNTE--GKREGYSADSAQEASPARQNVSSASNPENDSSHV 426
            ...||:     ..|:|......::..|..  |.|:.......::|.|..:.:....:||.:.|.|
 Worm   668 KTGDVV-----QIDVDGSPRITRSHANNHPMGHRKIQEKPIVEDAIPHLEPIIDGYHPERNESVV 727

Human   427 RIT---IPIKAPSLD---------PTNHKRKKRQSIKAVVEKIMPEKALAS----GITMSSEVVN 475
            |..   :.::.|.::         ||::|..:|..:::....::...|..|    |: ..::.:|
 Worm   728 RDVMEPLDVQIPQMNGEHHQTFVSPTSNKSLRRCGLRSDYSSVLNSPASTSQESTGM-RDTQRLN 791

Human   476 RILS-NSEGNKKDPRV--------PKLSKMIENESPS-------VGLETGGNAEKVIPGGVSKPR 524
            ::|| |:.|..:.||:        |:....|.|...|       |..:......::|......||
 Worm   792 KVLSKNNIGELESPRLNGTRVLSPPRTRHQISNAIDSDAFNDMPVLTQEPVQERRMIAQVFEIPR 856

Human   525 KPPMVMTPPTCTDHSPSRKLPEIQHPKFAAKRRWTCSKPKPSTMLREAVMATSDKLMLEPPSAYP 589
            |        |...:.||....: ||.:|.     .||.........:...:     |:.||...|
 Worm   857 K--------TTAYNQPSSSNSQ-QHGQFQ-----VCSNGSLGFFHPQIYQS-----MMTPPGIVP 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SETBP1XP_024306917.1 None
set-19NP_001379854.1 SET 175..322 CDD:214614
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161470054
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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