DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNED1 and Sned1

DIOPT Version :10

Sequence 1:XP_011509233.1 Gene:SNED1 / 25992 HGNCID:24696 Length:1437 Species:Homo sapiens
Sequence 2:NP_766051.4 Gene:Sned1 / 208777 MGIID:3045960 Length:1403 Species:Mus musculus


Alignment Length:21 Identity:8/21 - (38%)
Similarity:13/21 - (61%) Gaps:0/21 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   177 QLKVAQAQPVDPTCRVLVVVG 197
            ||:|.:.:|.|...:|..|:|
Mouse    22 QLQVKEKEPFDKVYQVGTVLG 42

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNED1XP_011509233.1 NIDO 128..284 CDD:214712 8/21 (38%)
EGF_CA 296..332 CDD:238011
EGF_CA 335..371 CDD:238011
EGF_CA 411..447 CDD:238011
EGF_CA 455..488 CDD:238011
EGF_CA 569..601 CDD:238011
EGF_CA 609..640 CDD:238011
EGF_CA 645..679 CDD:238011
EGF_CA <688..717 CDD:238011
CCP 722..775 CDD:153056
EGF_CA 778..813 CDD:238011
EGF_CA 817..851 CDD:238011
EGF_CA 854..889 CDD:238011
fn3 932..1012 CDD:394996
FN3 <1000..>1214 CDD:442628
EGF_CA 1336..1367 CDD:238011
Sned1NP_766051.4 NIDO 104..260 CDD:214712
EGF_CA 272..308 CDD:238011
EGF_CA 311..347 CDD:238011
EGF_CA 387..423 CDD:238011
EGF_CA 433..464 CDD:238011
EGF_CA 545..577 CDD:238011
EGF_CA 585..616 CDD:238011
EGF_CA 621..655 CDD:238011
EGF_CA <664..693 CDD:238011
CCP 698..752 CDD:153056
EGF_CA 754..789 CDD:238011
EGF_CA 793..827 CDD:238011
EGF_CA 830..865 CDD:238011
FN3 909..>1177 CDD:442628
EGF_CA 1311..1342 CDD:238011
Blue background indicates that the domain is not in the aligned region.

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