DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHMP2B and VPS24

DIOPT Version :10

Sequence 1:NP_001397706.1 Gene:CHMP2B / 25978 HGNCID:24537 Length:245 Species:Homo sapiens
Sequence 2:NP_012883.1 Gene:VPS24 / 853825 SGDID:S000001524 Length:224 Species:Saccharomyces cerevisiae


Alignment Length:205 Identity:52/205 - (25%)
Similarity:101/205 - (49%) Gaps:24/205 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    47 KEQNRELRGTQR-------AIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQK 104
            |||.|.:|...|       ..:|:...|:.:.:||   |||.||..:....::.||:|..:.||.
Yeast    14 KEQQRRIRSVLRKNGRNIEKSLRELTVLQNKTQQL---IKKSAKKNDVRTVRLYAKELYQINKQY 75

Human   105 TRTFAVSSKVTSMSTQTKV-----MNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKEN 164
            .|.:  :|:....|.:.|:     ||:   ::..|:.:|..|:.||..:...:...||...:||.
Yeast    76 DRMY--TSRAQLDSVRMKIDEAIRMNT---LSNQMADSAGLMREVNSLVRLPQLRNTMIELEKEL 135

Human   165 MKMEMTEEMINDTLDDIFD-GSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKA 228
            ||..:..||::||::.:.| |.:.:|...:.||:::::...|....:.:.|:...   :|:..:.
Yeast   136 MKSGIISEMVDDTMESVGDVGEEMDEAVDEEVNKIVEQYTNEKFKNVDQVPTVEL---AANEEEQ 197

Human   229 TISDEEIERQ 238
            .|.||:::.:
Yeast   198 EIPDEKVDEE 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHMP2BNP_001397706.1 Snf7 48..217 CDD:460896 47/181 (26%)
VPS24NP_012883.1 Snf7 19..189 CDD:460896 44/177 (25%)

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