DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPDH and Gapdh1

DIOPT Version :10

Sequence 1:NP_002037.2 Gene:GAPDH / 2597 HGNCID:4141 Length:335 Species:Homo sapiens
Sequence 2:NP_525108.2 Gene:Gapdh1 / 35728 FlyBaseID:FBgn0001091 Length:332 Species:Drosophila melanogaster


Alignment Length:331 Identity:253/331 - (76%)
Similarity:288/331 - (87%) Gaps:1/331 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     5 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVI 69
            |:|:||||||||||.|||.:.| ..:||:||||||:|||||:|::|||||:|.|||.||.|.||:
  Fly     3 KIGINGFGRIGRLVLRAAIDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTVAAEGGFLVV 66

Human    70 NGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMG 134
            ||..||:|.||||:.|.|..|||||||||||||||::||..||:||||:||||||||||||||.|
  Fly    67 NGQKITVFSERDPANINWASAGAEYVVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCG 131

Human   135 VNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDG 199
            ||.:.|...:|::|||||||||||||||||:|||.|||||||||||.||||||||||||||||||
  Fly   132 VNLDAYSPDMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDG 196

Human   200 RGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQ 264
            |||.||||||:||||||||||||.||||||||||||||.||||||||.||.|.|.||:||..|::
  Fly   197 RGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGATYDEIKAKVEE 261

Human   265 ASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMA 329
            ||:||||||||||:.:|||:||.||||||.|||.|||:|||.||||||||||||||||||:||:.
  Fly   262 ASKGPLKGILGYTDEEVVSTDFFSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDLIK 326

Human   330 HMASKE 335
            :|.||:
  Fly   327 YMQSKD 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPDHNP_002037.2 PLN02272 2..332 CDD:177912 250/326 (77%)
Interaction with WARS1. /evidence=ECO:0000269|PubMed:15628863 2..148 97/142 (68%)
[IL]-x-C-x-x-[DE] motif. /evidence=ECO:0000305|PubMed:25417112 245..250 3/4 (75%)
Gapdh1NP_525108.2 PLN02272 <2..328 CDD:177912 250/325 (77%)

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