DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAP43 and igl

DIOPT Version :10

Sequence 1:NP_001123536.1 Gene:GAP43 / 2596 HGNCID:4140 Length:274 Species:Homo sapiens
Sequence 2:NP_477060.1 Gene:igl / 36681 FlyBaseID:FBgn0013467 Length:240 Species:Drosophila melanogaster


Alignment Length:206 Identity:55/206 - (26%)
Similarity:77/206 - (37%) Gaps:64/206 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    48 EKNDDDQKIEQDGIKPEDKAHKAATKIQASFRGHITRKKLKGEKKDDVQAAEAEANKKDEAPVAD 112
            |.|||           ||:| ||||||||.||||..|:.:   ||.:.:.|....:....||.| 
  Fly    92 EFNDD-----------EDEA-KAATKIQAVFRGHKVRETM---KKSETKTATNNGSAAGAAPSA- 140

Human   113 GVEKKGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGDAATEQAAPQAPASSEEKAGSAETE 177
                     ..||||.:.     ||.||      |.:.|.|          |...:....:.:.:
  Fly   141 ---------AAAEAAASA-----EPTKA------ELEAEFD----------PNDKDLCHAALKIQ 175

Human   178 SATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAA-------TTPAAEDAAAKATAQPPTET 235
            |..:........:|  |||..|:.::      :|...|       |.|....||.|..|   :..
  Fly   176 STFRGHLARKLVNK--DAPEDEDIQE------ITKKVAEELDIDLTDPELNKAATKIQA---SFR 229

Human   236 GESSQAEENIE 246
            |..::.:.|.|
  Fly   230 GHKTRKDANPE 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAP43NP_001123536.1 IQCD 64..92 CDD:467745 16/27 (59%)
Neuromodulin 103..274 CDD:461961 32/151 (21%)
iglNP_477060.1 Adgb_C_mid-like <74..>129 CDD:412094 23/51 (45%)
IQCD 99..>121 CDD:467745 14/25 (56%)
IQ motif 104..122 CDD:412094 11/20 (55%)
Adgb_C_mid-like <169..>209 CDD:412094 8/47 (17%)
IQ 169..185 CDD:197470 1/15 (7%)
IQ motif 172..189 CDD:412094 1/16 (6%)
globin helix A 196..209 CDD:412094 2/18 (11%)
IQCD 216..>238 CDD:467745 5/24 (21%)

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