| Sequence 1: | XP_011510965.1 | Gene: | NECTIN3 / 25945 | HGNCID: | 17664 | Length: | 580 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_508166.1 | Gene: | igcm-1 / 180433 | WormBaseID: | WBGene00018215 | Length: | 1073 | Species: | Caenorhabditis elegans |
| Alignment Length: | 373 | Identity: | 82/373 - (21%) |
|---|---|---|---|
| Similarity: | 144/373 - (38%) | Gaps: | 112/373 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Human 94 EPHVTAVWGKNVSLKCLIE---VNETITQISWEKIHG-------KSSQTVAVHHPQY---GFSVQ 145
Human 146 GEYQGRVLFKNYSLNDATITLHNIGFSDSGKYICKAVTFPLGNAQSS--TTVTVLVEPTVSLIK- 207
Human 208 -GPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFA- 270
Human 271 ---------------RGRRITCVVKHPAL----EKDIRYSFILDIQYAPEVSVTGYDGNWFVG-R 315
Human 316 KG--VNLKCNADANPPPFKSVW------SRLDGQ-WPDGLLASDNTLHFVHPLTFNYSGVYICKV 371
Human 372 TNSLGQRSDQKVIYISDPPTTTTLQPTIQWHP--------STADIEDL 411 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| NECTIN3 | XP_011510965.1 | IgV_1_Nectin-3_like | 89..198 | CDD:409470 | 21/118 (18%) |
| FR1 | 89..112 | CDD:409470 | 3/17 (18%) | ||
| Ig strand A | 89..93 | CDD:409470 | |||
| Ig strand A' | 95..99 | CDD:409470 | 1/3 (33%) | ||
| Ig strand B | 104..112 | CDD:409470 | 1/7 (14%) | ||
| CDR1 | 113..117 | CDD:409470 | 0/3 (0%) | ||
| FR2 | 118..124 | CDD:409470 | 2/5 (40%) | ||
| Ig strand C | 119..124 | CDD:409470 | 2/4 (50%) | ||
| CDR2 | 125..144 | CDD:409470 | 3/28 (11%) | ||
| Ig strand C' | 134..139 | CDD:409470 | 2/4 (50%) | ||
| Ig strand C' | 141..145 | CDD:409470 | 1/3 (33%) | ||
| FR3 | 145..183 | CDD:409470 | 8/37 (22%) | ||
| Ig strand D | 152..156 | CDD:409470 | 0/3 (0%) | ||
| Ig strand E | 161..168 | CDD:409470 | 0/6 (0%) | ||
| Ig strand F | 175..183 | CDD:409470 | 3/7 (43%) | ||
| CDR3 | 184..187 | CDD:409470 | 0/2 (0%) | ||
| Ig strand G | 187..197 | CDD:409470 | 4/11 (36%) | ||
| FR4 | 188..198 | CDD:409470 | 4/11 (36%) | ||
| IgC1_2_Nectin-3-4_like | 201..296 | CDD:409501 | 24/116 (21%) | ||
| Ig strand A | 201..207 | CDD:409501 | 1/5 (20%) | ||
| Ig strand B | 220..227 | CDD:409501 | 2/6 (33%) | ||
| Ig strand C | 232..238 | CDD:409501 | 0/5 (0%) | ||
| Ig strand C' | 240..242 | CDD:409501 | 0/1 (0%) | ||
| Ig strand D | 244..251 | CDD:409501 | 0/6 (0%) | ||
| Ig strand E | 256..264 | CDD:409501 | 1/7 (14%) | ||
| Ig strand F | 274..281 | CDD:409501 | 2/6 (33%) | ||
| Ig strand G | 287..293 | CDD:409501 | 1/5 (20%) | ||
| Ig | 300..386 | CDD:472250 | 26/95 (27%) | ||
| Ig strand B | 318..322 | CDD:409353 | 3/3 (100%) | ||
| Ig strand C | 332..336 | CDD:409353 | 1/9 (11%) | ||
| Ig strand E | 351..356 | CDD:409353 | 0/4 (0%) | ||
| Ig strand F | 366..371 | CDD:409353 | 1/4 (25%) | ||
| Ig strand G | 381..384 | CDD:409353 | 0/2 (0%) | ||
| TM_EGFR-like | 435..463 | CDD:213052 | |||
| igcm-1 | NP_508166.1 | Ig | 140..235 | CDD:472250 | 24/111 (22%) |
| Ig strand B | 162..166 | CDD:409418 | 1/3 (33%) | ||
| Ig strand C | 176..181 | CDD:409418 | 1/16 (6%) | ||
| Ig strand E | 203..207 | CDD:409418 | 0/3 (0%) | ||
| Ig strand F | 217..222 | CDD:409418 | 1/4 (25%) | ||
| Ig strand G | 231..234 | CDD:409418 | 0/2 (0%) | ||
| Ig_3 | 245..316 | CDD:464046 | 22/83 (27%) | ||
| Ig_3 | 333..398 | CDD:464046 | 4/17 (24%) | ||
| IG_like | 437..513 | CDD:214653 | |||
| Ig strand B | 443..447 | CDD:409353 | |||
| Ig strand C | 458..461 | CDD:409353 | |||
| Ig strand E | 478..482 | CDD:409353 | |||
| Ig strand F | 492..497 | CDD:409353 | |||
| Ig | 538..617 | CDD:409353 | |||
| Ig strand C | 549..553 | CDD:409353 | |||
| Ig strand E | 586..590 | CDD:409353 | |||
| Ig strand F | 601..606 | CDD:409353 | |||
| Ig | 642..727 | CDD:472250 | |||
| Ig strand B | 650..654 | CDD:409353 | |||
| Ig strand C | 663..667 | CDD:409353 | |||
| Ig strand E | 688..699 | CDD:409353 | |||
| Ig strand F | 709..714 | CDD:409353 | |||
| FN3 | 733..843 | CDD:238020 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||