DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NALCN and CCH1

DIOPT Version :9

Sequence 1:XP_024305104.1 Gene:NALCN / 259232 HGNCID:19082 Length:1786 Species:Homo sapiens
Sequence 2:NP_011733.3 Gene:CCH1 / 853131 SGDID:S000003449 Length:2039 Species:Saccharomyces cerevisiae


Alignment Length:1743 Identity:380/1743 - (21%)
Similarity:697/1743 - (39%) Gaps:429/1743 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   150 DIVDQMSPW-GM------------LRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWSVS 201
            |:|..:|.| ||            :||.:||.::|..|: ...:.....|...||....|:.:||
Yeast   498 DLVSSVSFWLGMFLSIKSYDTKTGIRIFKPLAILRILRL-VNVDTGMPSILRGLKYGIPQLVNVS 561

Human   202 IFLLFFLLLYGILGVQMF-GTFTYHCV-VNDTKPGNVTWNSLAIPDTHCSP-------------- 250
            ..|::|.:.:||||||:| |:|...|| .|...|.:.....:.....:..|              
Yeast   562 SMLVYFWIFFGILGVQIFQGSFRRQCVWFNPEDPTDTYQYDMQFCGGYLDPVTKRKQNYIYEDGS 626

Human   251 --ELEEGYQCPPGFKCMDLEDLGLSRQELGYSG---FNEIGTSIFTVYEAASQEGWVFLMYRAID 310
              .:.:|:.||...||:...:        .|:|   |:.|..|:..|:...|...:..|||..:|
Yeast   627 EGSVSKGFLCPQYSKCVSNAN--------PYNGRISFDNIVNSMELVFVIMSANTFTDLMYYTMD 683

Human   311 SFPRWRSYFYFITLIFFLA-WLVKNVFIAVIIETFAEIRVQFQQ---MWGSRSSTTSTATTQMFH 371
            | ....:..:||..||.|. ||: |:.|||::.:|.....::::   ::|||.       |....
Yeast   684 S-DEMAACLFFIVCIFVLTIWLL-NLLIAVLVSSFEIANEEYKKKKFIYGSRK-------TGYVA 739

Human   372 EDAAGGWQLVAVDVNKPQGRAPACLQKMMR-----SSVFHMFILSMVTVDVIVAASNYYKGENFR 431
            ....|.|:...:..|  |.:.|...||.:.     ..:|.:.|:..:.:...|..|......|..
Yeast   740 RIVTGYWKYFKLKAN--QTKFPNWSQKGLAIYSHVEFIFVILIICDIGMRASVKVSTSANCNNIL 802

Human   432 RQYDE-----FYLAEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVI-----------GT 480
            .:.|.     .::..:|..||:    |..:|     .:::...:.::.::.|           |.
Yeast   803 LKTDRGISIVLFIESLARLVLY----LPNMW-----KFLTKPSYVYDFIISIITLVISCLAVEGV 858

Human   481 TLHVYPDLYHSQFTYFQVLRVVRLIKISPALEDFVYK-IFGPGK---KLGSLVVFTASLLIVMSA 541
            ..|:|     :..:.|.:.|..|:| ||..|...::| |...|.   .|.|...|...|:.::.|
Yeast   859 LGHMY-----AWLSIFHISRFYRVI-ISFNLTKKLWKQILSNGVMIWNLSSFYFFFTFLVAIIMA 917

Human   542 ISLQMFCFVEEL-DR---FTTFPRAFMSMFQILTQEGWVDVM----DQTLNAVGHMWAPVVAIYF 598
            :..:.....||: |:   ..:.|.:|:|:|.|.:.|.|.|::    ..:.|.....:.   :::|
Yeast   918 VYFEGVIPPEEMADQPFGMYSLPNSFLSLFIIGSTENWTDILYALQKHSPNISSTFFC---SVFF 979

Human   599 ILYHLFATLILLSLFVAVILDNLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMV 663
            |::.|.:..::|::|:|:|.:::|:.|:                 ||.|.:::.:.||. .||  
Yeast   980 IIWFLLSNSVILNIFIALISESMEVKEE-----------------EKRPQQIKHYLKFV-YPQ-- 1024

Human   664 KISKLPSDFTVPKIRESF-----------MKQFIDRQQQDTCCLLRSLPTTSSSSCDHSKRSAIE 717
            ||.:......|.:||:.|           .|||:.|.     ..:.::........|..|....|
Yeast  1025 KIQEYTHASLVARIRKKFFGGHRNEDTRDFKQFLMRG-----TAIMNIAQNMGELADEFKEPPSE 1084

Human   718 DNKYIDQKLRKSVFSIRARNLLEKETAVTKILSKRPLPTSSPISIRCCLYLGRSHCHSSGVRACT 782
                               ||.:|.      |||..:                      ||.:..
Yeast  1085 -------------------NLFKKG------LSKLTI----------------------GVPSLK 1102

Human   783 RQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGKSLETLTQDHSNTVRYRNAQ 847
            |.||.                                                  :|...|:|:.
Yeast  1103 RLRMF--------------------------------------------------ANNPFYKNSD 1117

Human   848 REDSEIKMIQEKKEQAEMKRKVQEEEL--RENHPYFDKPLFIVGREHRFRNFCRVVV-------- 902
            ...:|...|..:....|: .:.::|:|  .:.:|.|:...:....:||||.||:.:|        
Yeast  1118 VVFTETNDINGRTYILEL-NEYEDEKLDYLKKYPLFNYSYYFFSPQHRFRRFCQRLVPPSTGKRT 1181

Human   903 -RARFNASKTDPVTGAVKNTKYHQL-YDLLGLVTYLDWVMIIVTICSCISMMFESPFRRVMH--- 962
             .:||....||...   |.:.:|.: .|:...:..|..:::||  |||    :.:|..|:.|   
Yeast  1182 DGSRFFEDSTDLYN---KRSYFHHIERDVFVFIFALATILLIV--CSC----YVTPLYRMHHKMG 1237

Human   963 ----APTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWMPQN 1023
                :..|..|   |:...|||..:|.:|||..::|.|.:|:....:| |..|:|:    |:...
Yeast  1238 TWNWSSALDCA---FIGAFSIEFIVKTVADGFIYSPNAYLRNPWNFID-FCVLISM----WINLI 1294

Human  1024 VPAESGAQL------LMVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLVSILLLTLMLVFASF 1082
            ...::...|      |..||.||.|.|.....|...:|  :|.|..:||...::.|:|:..|..:
Yeast  1295 AYLKNNGNLSRIFKGLTALRALRCLTISNTARQTFNLV--MFDGLNKIFEAGLISLSLLFPFTVW 1357

Human  1083 GVQLFAGKLAKCNDPNIIRREDC-----NGIFRINVSVSKNLNLKLRPGEKKPGFWVPRVWANPR 1142
            |:.:|.|:|..|||.: :.|.||     |.:|:.::                   ..|||:..| 
Yeast  1358 GLSIFKGRLGTCNDGS-LGRADCYNEYSNSVFQWDI-------------------MSPRVYQQP- 1401

Human  1143 NFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVG---PI-------HGIYIHVFVFLGCMIGLT 1197
            ..:.|:..:|..:|::::||:|||::.:.:::..|   |.       :.:::.:|.||..:..|.
Yeast  1402 YLHLDSFASAFSSLYQIISLEGWVDLLENMMNSSGIGTPATVMGSAGNALFLVLFNFLSMVFILN 1466

Human  1198 LFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFRAKMYD--ITQHPFF 1260
            |||..::.|.....|:|..|::::.|.:.:..|..|:|..:|...:....|...|.  :.:..|:
Yeast  1467 LFVSFIVNNQARTTGSAYFTIEEKAWLESQKLLSQAKPKAIPNLIELSRVRQFFYQLAVEKKNFY 1531

Human  1261 KRTIALLVLAQSV--LLSVKWDVEDPVTVPLATMSVVFTF---IFVLEVTMKIIAMSPAGFWQSR 1320
            ..:...:||...:  |||..:   :|..: :....|.|.|   :|:::..:.:....|..:::.:
Yeast  1532 YASFLQVVLYLHIIMLLSRSY---NPGNL-IGYQGVYFMFSTSVFLIQEALHMCGEGPRLYFRQK 1592

Human  1321 RNRYDLLVTSLGVVWVVLHFALLNAYTYMMGA------------CVIVFRFFSICGKHVTLKMLL 1373
            .|...|.:       :::.| ::||..:.:.|            .:::|.|  |..::.||..||
Yeast  1593 WNSIRLSI-------IIIAF-IMNAVAFHVPASHYWFHNIKGFFLLVIFLF--IIPQNDTLTELL 1647

Human  1374 LTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAITVLFRIVTGED 1438
            .|.:.|:.....:.....:|.|.||.|...:||..:.|.|...:.||.:..|::.||||...||.
Yeast  1648 ETAMASLPPILSLTYTWGVLFLVYAIALNQIFGLTRLGSNTTDNINFRTVIKSMIVLFRCSFGEG 1712

Human  1439 WNKIMHDCMVQPPFCTPDE-FTYWATDCGNYAGALMYFCSFYVIIAYIMLNLLVAIIVENFSLFY 1502
            ||.||.|..|..|:|:.|: .||  ||||:...|.:...|:.:|..||.:|:.|::|:.|||..|
Yeast  1713 WNYIMADLTVSEPYCSSDDNSTY--TDCGSETYAYLLLMSWNIISMYIFVNMFVSLIIGNFSYVY 1775

Human  1503 STEEDQL-LSYNDLRHFQIIWNMVDDKREG---------VIPTFRVKFLLRLLRGRL-------- 1549
            .:...:. ::.::::.:...|:..|....|         ::.:|......::..|||        
Yeast  1776 RSGGSRSGINRSEIKKYIEAWSKFDTDGTGELELSYLPRIMHSFDGPLSFKIWEGRLTIKSLVEN 1840

Human  1550 ------------EVDL----------DKDKLLFKHMCYE--MERLH----NGGDVTFHDVLSMLS 1586
                        ::||          ||.|::.:.:.|.  ::.:|    ..|.:.|.|:|..:.
Yeast  1841 YMEVNPDDPYDVKIDLIGLNKELNTIDKAKIIQRKLQYRRFVQSIHYTNAYNGCIRFSDLLLQIP 1905

Human  1587 -YRSVDIRKSLQLEE------LLAR--EQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSII 1642
             |.:...|:.|.:::      :|.:  :.||.....:|.:..:..|...|  |::...:....:.
Yeast  1906 LYTAYSARECLGIDQYVHHLYILGKVDKYLENQRNFDVLEMVVTRWKFHC--RMKRTIEPEWDVK 1968

Human  1643 HSLRESQQQELSRFLNP-PSI----ETTQPSEDTNAN--------SQDNSMQP 1682
            .....|....::..|.| |.|    ....|..|...|        :||::|:|
Yeast  1969 DPTVSSHISNINVNLEPAPGILEREPIATPRMDYGVNNFMWSPRMNQDSTMEP 2021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NALCNXP_024305104.1 Ion_trans 55..350 CDD:306908 63/234 (27%)
Ion_trans 402..622 CDD:306908 49/247 (20%)
Ion_trans 935..1209 CDD:306908 78/301 (26%)
Ion_trans 1257..1506 CDD:306908 72/266 (27%)
CCH1NP_011733.3 Ion_trans <483..722 CDD:395416 63/234 (27%)
Ion_trans 769..1010 CDD:395416 52/275 (19%)
Ion_trans 1210..1480 CDD:395416 78/306 (25%)
Ion_trans 1529..1776 CDD:395416 71/262 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 94 1.000 Domainoid score I1897
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004135
OrthoInspector 1 1.000 - - otm53071
orthoMCL 1 0.900 - - OOG6_104443
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R175
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.740

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