DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATL3 and Atl3

DIOPT Version :9

Sequence 1:NP_056274.3 Gene:ATL3 / 25923 HGNCID:24526 Length:541 Species:Homo sapiens
Sequence 2:XP_006526667.1 Gene:Atl3 / 109168 MGIID:1924270 Length:552 Species:Mus musculus


Alignment Length:530 Identity:500/530 - (94%)
Similarity:514/530 - (96%) Gaps:0/530 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    12 SRGADDAMESSKPGPVQVVLVQKDQHSFELDEKALASILLQDHIRDLDVVVVSVAGAFRKGKSFI 76
            :|.:.||||:.||||||||||.|:||||||:|:||||:|||||||||||||||||||||||||||
Mouse    23 TRHSSDAMENGKPGPVQVVLVHKEQHSFELEERALASVLLQDHIRDLDVVVVSVAGAFRKGKSFI 87

Human    77 LDFMLRYLYSQKESGHSNWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLM 141
            |||||||||||||.|||:||||||||||||||||||||||||||||||||||:||.|||||||||
Mouse    88 LDFMLRYLYSQKEGGHSDWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVKKPCGKKVAVVLM 152

Human   142 DTQGAFDSQSTVKDCATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQ 206
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   153 DTQGAFDSQSTVKDCATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQ 217

Human   207 TLMFLVRDWSFPYEYSYGLQGGMAFLDKRLQVKEHQHEEIQNVRNHIHSCFSDVTCFLLPHPGLQ 271
            |||||:|||||||||:||||||||||||||.||||||||||||||||||||||||||||||||||
Mouse   218 TLMFLIRDWSFPYEYNYGLQGGMAFLDKRLHVKEHQHEEIQNVRNHIHSCFSDVTCFLLPHPGLQ 282

Human   272 VATSPDFDGKLKDIAGEFKEQLQALIPYVLNPSKLMEKEINGSKVTCRGLLEYFKAYIKIYQGED 336
            |||||:|||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   283 VATSPNFDGKLKDIASEFKEQLQALIPYVLNPSKLMEKEINGSKVTCRGLLEYFKAYIKIYQGED 347

Human   337 LPHPKSMLQATAEANNLAAAASAKDIYYNNMEEVCGGEKPYLSPDILEEKHCEFKQLALDHFKKT 401
            |||||||||||||||||||||||||||||||||:|||||||||||||||||.||||||||||||.
Mouse   348 LPHPKSMLQATAEANNLAAAASAKDIYYNNMEEICGGEKPYLSPDILEEKHLEFKQLALDHFKKI 412

Human   402 KKMGGKDFSFRYQQELEEEIKELYENFCKHNGSKNVFSTFRTPAVLFTGIVALYIASGLTGFIGL 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.||||||
Mouse   413 KKMGGKDFSFRYQQELEEEIKELYENFCKHNGSKNVFSTFRTPAVLFTGIAALYIASGFTGFIGL 477

Human   467 EVVAQLFNCMVGLLLIALLTWGYIRYSGQYRELGGAIDFGAAYVLEQASSHIGNSTQATVRDAVV 531
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||.||||||
Mouse   478 EVVAQLFNCMVGLLLIALLTWGYIRYSGQYRELGGAIDSGAAYVLEQASSHIGNSTQAAVRDAVV 542

Human   532 GRPSMDKKAQ 541
            |||..|||:|
Mouse   543 GRPPADKKSQ 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATL3NP_056274.3 P-loop_NTPase 37..305 CDD:304359 255/267 (96%)
Atl3XP_006526667.1 P-loop_NTPase 48..316 CDD:393306 255/267 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83967572
Domainoid 1 1.000 528 1.000 Domainoid score I6739
eggNOG 1 0.900 - - E1_KOG2037
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9149
Inparanoid 1 1.050 1035 1.000 Inparanoid score I5521
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG58971
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0001595
OrthoInspector 1 1.000 - - oto128008
orthoMCL 1 0.900 - - OOG6_102856
Panther 1 1.100 - - LDO PTHR10751
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4011
SonicParanoid 1 1.000 - - X1147
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1818.300

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