DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GALNT2 and Pgant9

DIOPT Version :9

Sequence 1:XP_016856452.1 Gene:GALNT2 / 2590 HGNCID:4124 Length:636 Species:Homo sapiens
Sequence 2:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster


Alignment Length:600 Identity:236/600 - (39%)
Similarity:316/600 - (52%) Gaps:98/600 - (16%)


- Green bases have known domain annotations that are detailed below.


Human     2 RRRSR---MLLCFAF-LWVLGIAYYMY---------------SGGGSA--LAGGAG--------- 36
            ||||.   .|:.||. :|.. ||:.:|               ||.|||  :.||||         
  Fly     6 RRRSTTIVKLVAFALAIWFC-IAFLVYTDDTRRRAAQEGAGASGAGSAPGVGGGAGGLGDPIALA 69

Human    37 -----------------GGAGRKEDWNEID--PI---KKKDLHHSNGEEKAQSMETLPP----GK 75
                             ||.|:|:..:|.|  |.   .|.||......:||.......|    .|
  Fly    70 LRNEPAGEDFGINGNVIGGGGQKQAHDEADIPPTVGKHKADLQAERMRKKAAEQPKKKPQEDSKK 134

Human    76 VRWPDFNQEAYVG-------------GTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQ 127
            |..|..|.|...|             ..|.::..|.:.:|.|||..||.:.:.|.:||.|...|:
  Fly   135 VIDPPANFEENPGELGKPVRLPKEMSDEMKKAVDDGWTKNAFNQYVSDLISVHRTLPDPRDAWCK 199

Human   128 -RKQWRVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDP------EDGA 185
             ..::..:||.|.|:|.|||||.:.|||||.|||.:||.|||.:||||||||:.|      ||  
  Fly   200 DEARYLTNLPKTDVIICFHNEAWTVLLRTVHSVLDRSPEHLIGKIILVDDYSDMPHLKRQLED-- 262

Human   186 LLGKIEKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVS 250
            ......||:::|..:||||:|:|:.||:.|::.|||:|||||||.|.||||||:|:|.:.|.||.
  Fly   263 YFAAYPKVQIIRGQKREGLIRARILGANHAKSPVLTYLDSHCECTEGWLEPLLDRIARNSTTVVC 327

Human   251 PIIDVINMDNFQY-----VGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGL 310
            |:||||:.:..:|     .|.:.   |||||||.|.| :..||:.|.|..:...|:.:|.:||||
  Fly   328 PVIDVISDETLEYHYRDSGGVNV---GGFDWNLQFSW-HPVPERERKRHNSTAEPVYSPTMAGGL 388

Human   311 FVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGT 375
            |.:|:.:|:.||.||...|:|||||||:||:.|.|||:|||:|||.|||:|||:.||.:..|. .
  Fly   389 FSIDREFFDRLGTYDSGFDIWGGENLELSFKTWMCGGTLEIVPCSHVGHIFRKRSPYKWRSGV-N 452

Human   376 VFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENVYPELRVP 440
            |..:|:.|.||||||||..:||..:.:.:. .:|::..|.:||..|.||.|||||:|:||||.:|
  Fly   453 VLKKNSVRLAEVWMDEYSQYYYHRIGNDKG-DWGDVSDRRKLRNDLKCKSFKWYLDNIYPELFIP 516

Human   441 DHQDIAFGALQQ----GTNCLDTLG--HFADGVVGVYECHNAGGNQVCAWGSQVTCRPRES-RSW 498
            . ..:|.|.::.    |..|||...  ......||.|.||..||||..........|..:| ..:
  Fly   517 G-DSVAHGEIRNLGYGGRTCLDAPAGKKHQKKAVGTYPCHRQGGNQYWMLSKAGEIRRDDSCLDY 580

Human   499 GGPDVRSPSCHLSPG 513
            .|.||....||...|
  Fly   581 AGKDVTLFGCHGGKG 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GALNT2XP_016856452.1 None
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 143/277 (52%)
pp-GalNAc-T 213..510 CDD:133004 153/304 (50%)
Ricin_B_lectin 521..640 CDD:279046 22/74 (30%)
RICIN 523..642 CDD:238092 21/72 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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