DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAMR1 and CG9649

DIOPT Version :10

Sequence 1:NP_056245.2 Gene:PAMR1 / 25891 HGNCID:24554 Length:737 Species:Homo sapiens
Sequence 2:NP_650343.1 Gene:CG9649 / 41727 FlyBaseID:FBgn0038211 Length:504 Species:Drosophila melanogaster


Alignment Length:525 Identity:117/525 - (22%)
Similarity:186/525 - (35%) Gaps:161/525 - (30%)


- Green bases have known domain annotations that are detailed below.


Human   273 NLLEAGKSKIKASEDSLSVLEERNCSDPGGPVNGYQKITGGPGL--------INGRHAKIGTVVS 329
            |.||        .||||     |:......|:| |:.....||:        :||:.|  ...|.
  Fly    78 NFLE--------DEDSL-----RHRLTNNEPIN-YRIDFPTPGVVPKLTKVTVNGKVA--CEAVP 126

Human   330 FFCNNSYVLSGNEKRTC----------QQNGEWSGKQPICIKACREPKISDLVRRRVLPMQVQSR 384
            |...::.:......||.          :.:.:|............|.:..:.|:|| .|.|..||
  Fly   127 FGAPSTRLSLSRTLRTSVPLAAIPPSQRTDHQWPQAPQTNYTVYEEEEEEEPVQRR-RPQQRPSR 190

Human   385 ETPLHQLYSAAFSKQKLQSAPTKKPALPFGDLPM-------GYQHLHTQLQYECISPFYRRLGSS 442
            ..|              |.||::....|...||.       ....:|........|.||.:    
  Fly   191 PRP--------------QQAPSRPRLQPVPQLPQEPEFQTSARPSVHPSNTPAQASKFYPQ---- 237

Human   443 RRTCLRTGKWSGRAPSCIPICGKIENITAP------KTQGLRWPWQAAIYRRTSGVHDGSLHKGA 501
                 ..|:.||       |||:.:.|..|      :.:..:.||.||::.          |.|.
  Fly   238 -----TIGQLSG-------ICGREKVIQTPFIHNGIEVERGQLPWMAALFE----------HVGR 280

Human   502 -WFLVCSGALVNERTVVVAAHCVTDLGKVTMIKTADLKVVLGKFYRDDDRD---EKTIQS----- 557
             :..:|.|.|::.|||:.||||                      :|...|:   |:||.|     
  Fly   281 DYNFLCGGTLISARTVISAAHC----------------------FRFGSRNLPGERTIVSLGRNS 323

Human   558 ---------LQISAIILHPNYDP-ILLDADIAILKLLDKARISTRVQPICLAASRDLSTSFQESH 612
                     |.::.:::|..|:| :..|||:|:|:|.:...|...::|||| .:.:........|
  Fly   324 LDLFSSGATLGVARLLIHEQYNPNVYTDADLALLQLSNHVDIGDYIKPICL-WNENFLLELPSGH 387

Human   613 IT-VAGWNVLADVRSPGFKNDTLRSGVVSVVDSL--------LCEEQHEDHGIPVSVTDNMFCAS 668
            .: ||||.  .|.:.    |...|...::..|.:        |.||..:      .:|.:..|||
  Fly   388 KSYVAGWG--EDEKG----NRNTRLAKMTDTDIITQWECRGNLSEENAK------FITSHTICAS 440

Human   669 WEPTAPSDICTAETGGIAAVSFPGRASPEPRWHLMGLVSWSYDKT--CSHRLSTAFTKVLPFKDW 731
              ....|..|:.::||...:      ..:..|.|.|:||.....|  |:..|...:|.|....:|
  Fly   441 --NAQASGPCSGDSGGGLML------QEQDIWMLRGVVSAGQRMTNRCNLTLPVIYTDVAKHIEW 497

Human   732 IERNM 736
            :..:|
  Fly   498 LLSSM 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAMR1NP_056245.2 CUB 128..234 CDD:238001
EGF_CA 240..272 CDD:238011
CCP 297..360 CDD:153056 13/80 (16%)
CCP <425..460 CDD:153056 6/34 (18%)
Tryp_SPc 478..735 CDD:238113 68/286 (24%)
CG9649NP_650343.1 GD_N 29..132 CDD:464985 18/69 (26%)
Tryp_SPc 257..498 CDD:238113 67/293 (23%)
Blue background indicates that the domain is not in the aligned region.

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