DRSC/TRiP Functional Genomics Resources

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Protein Alignment POU2F3 and nub

DIOPT Version :10

Sequence 1:NP_001231611.1 Gene:POU2F3 / 25833 HGNCID:19864 Length:438 Species:Homo sapiens
Sequence 2:NP_001097153.1 Gene:nub / 34669 FlyBaseID:FBgn0085424 Length:961 Species:Drosophila melanogaster


Alignment Length:379 Identity:161/379 - (42%)
Similarity:202/379 - (53%) Gaps:100/379 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    12 DIKMSGDVADSTDARSTLSQVEPGNDRNGLDFNRQIKTEDLSDSLQQ----------------TL 60
            ::..||.:..:.|..:..:||.      ...|..|.:.:.||.:.||                .|
  Fly   628 ELLRSGSLGLAQDDPALTAQVA------AAQFLMQSQLQALSQASQQLQALQKQQQRQVDEPLQL 686

Human    61 SHRPCHLSQGPAMMSGNQMSGLNA--SPCQDMASL-----HPLQQLVLVPGHLQSVSQFLLSQTQ 118
            :|:   ::|.|...:.:.:....|  ||......|     ||||  :..|....|:         
  Fly   687 NHK---MTQQPRSSTPHSIRSPIAIRSPASSPQQLHHHHHHPLQ--ITPPSSAASL--------- 737

Human   119 PGQQGLQPNLLPFPQQQSGLLLPQTGPGLASQAFGHPGLPGSSLEPHLEASQHLPVPKHLPSSGG 183
                           :.||:|.|.|              |.|..:  :......|.||.:.|:..
  Fly   738 ---------------KLSGMLTPST--------------PTSGTQ--MSQGTTTPQPKTVASAAA 771

Human   184 A--------DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLS 240
            |        :|.:||||||:|||||||||||||||||||||||||||||||||||||||||||||
  Fly   772 ARAAGEPSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLS 836

Human   241 FKNMCKLKPLLEKWLNDAESSPS------DP-----SVSTPSSYPSLSEVFGRKRKKRTSIETNI 294
            |||||||||||:|||:||:.:..      ||     :||||       |:.||:|||||||||.|
  Fly   837 FKNMCKLKPLLQKWLDDADRTIQATGGVFDPAALQATVSTP-------EIIGRRRKKRTSIETTI 894

Human   295 RLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRINCPVATP 348
            |..|||.|..|.||:||||:.:|::|||||||||||||||||||||||..:.:|
  Fly   895 RGALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLDSP 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POU2F3NP_001231611.1 POU 185..259 CDD:197673 67/73 (92%)
Homeodomain 284..340 CDD:459649 42/55 (76%)
nubNP_001097153.1 POU 791..855 CDD:197673 60/63 (95%)
Homeodomain 884..940 CDD:459649 42/55 (76%)

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