DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GALE and Gale

DIOPT Version :9

Sequence 1:NP_000394.2 Gene:GALE / 2582 HGNCID:4116 Length:348 Species:Homo sapiens
Sequence 2:NP_001246537.1 Gene:Gale / 38076 FlyBaseID:FBgn0035147 Length:350 Species:Drosophila melanogaster


Alignment Length:345 Identity:208/345 - (60%)
Similarity:263/345 - (76%) Gaps:2/345 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILD 69
            |||||||||||||||||:|.|||..:.:||..||:..|..|||:|.||||:||:.|.|..:||.|
  Fly     6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFYRVDITD 70

Human    70 QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSAT 134
            :..::.:|:::....|.|||.|||||||.:.||.||..|:|||..|||.|..:.|...|:|||||
  Fly    71 REQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNVFKFVYSSSAT 135

Human   135 VYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGE 199
            |||.|::||:.|.||||.||:||||:|:|.||:::|||::||.|..|.||||||.|||.||.|||
  Fly   136 VYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVSLRYFNPVGAHISGRIGE 200

Human   200 DPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE--QC 262
            ||.|.|||||||::|||:|||.:|:|:|:|:.|.||||||||||:||||:||:.||.||:.  :.
  Fly   201 DPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIHIVDLAEGHVKALDKLRNIAET 265

Human   263 GCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLD 327
            |...||||||.|||||.||:|.|||||||:.|.:|.||.||||.|||:.:||.::|||.|..|:|
  Fly   266 GFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDRRSGDVATCYADATLADKKLGWKAERGID 330

Human   328 RMCEDLWRWQKQNPSGFGTQ 347
            :||||.||||.|||:|:..:
  Fly   331 KMCEDTWRWQSQNPNGYANK 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GALENP_000394.2 UDP_G4E_1_SDR_e 4..338 CDD:187558 203/334 (61%)
Substrate binding. /evidence=ECO:0000269|PubMed:10801319, ECO:0000269|PubMed:11279032, ECO:0000269|PubMed:11279193, ECO:0000303|PubMed:15175331 132..134 1/1 (100%)
Substrate binding. /evidence=ECO:0000269|PubMed:11279032, ECO:0000269|PubMed:11279193 185..187 1/1 (100%)
Substrate binding. /evidence=ECO:0000269|PubMed:10801319, ECO:0000269|PubMed:11279032, ECO:0000269|PubMed:11279193 206..208 1/1 (100%)
Substrate binding. /evidence=ECO:0000269|PubMed:10801319, ECO:0000269|PubMed:11279032, ECO:0000269|PubMed:11279193 224..226 0/1 (0%)
Substrate binding. /evidence=ECO:0000269|PubMed:11279032, ECO:0000269|PubMed:11279193 300..303 1/2 (50%)
GaleNP_001246537.1 UDP_G4E_1_SDR_e 5..341 CDD:187558 203/334 (61%)
galE 6..343 CDD:273487 204/336 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 416 1.000 Domainoid score I654
eggNOG 1 0.900 - - E1_COG1087
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H347
Inparanoid 1 1.050 441 1.000 Inparanoid score I1665
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54544
OrthoDB 1 1.010 - - D386435at33208
OrthoFinder 1 1.000 - - FOG0001696
OrthoInspector 1 1.000 - - oto88661
orthoMCL 1 0.900 - - OOG6_100506
Panther 1 1.100 - - LDO PTHR43725
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1246
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.840

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