DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FSCN2 and sn

DIOPT Version :9

Sequence 1:NP_001070650.1 Gene:FSCN2 / 25794 HGNCID:3960 Length:516 Species:Homo sapiens
Sequence 2:NP_001162697.1 Gene:sn / 31717 FlyBaseID:FBgn0003447 Length:512 Species:Drosophila melanogaster


Alignment Length:512 Identity:187/512 - (36%)
Similarity:286/512 - (55%) Gaps:37/512 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    15 GLVNDTDRYLTAESFGFKVNASAPSLKRKQTWVLEPDPGQGTAVLLRSSHLGRYLSAEEDGRVAC 79
            ||:|...:|:|||:||||:||:..|||:||.|.|||. ..|.:::...|||.:|||.::.|.|.|
  Fly    28 GLINGQHKYMTAETFGFKLNANGASLKKKQLWTLEPS-NTGESIIYLRSHLNKYLSVDQFGNVLC 91

Human    80 EAEQPGRDCRFLVLPQPD--GRWVLRSEPHGRFFGGTEDQLSCFATAVSPAELWTVHLAIHPQAH 142
            |:::.....||.:....|  |||.|::|..|.|.|||.|:|.|.|.....:|.||||||..||.:
  Fly    92 ESDERDAGSRFQISISEDGSGRWALKNESRGYFLGGTPDKLVCTAKTPGASEFWTVHLAARPQVN 156

Human   143 LLSVSRRRYVHLCPREDEMAADGDKPWGVDALLTLIFRSR---RYCLKSCDSRYLRSDGRLVWEP 204
            |.|:.|:|:.||...:||:..|.:.|||.|.|.||.||:.   ||.|.:|:::||.::|:|....
  Fly   157 LRSIGRKRFAHLSESQDEIHVDANIPWGEDTLFTLEFRAEEGGRYALHTCNNKYLNANGKLQVVC 221

Human   205 EPRACYTLEFKAGKLAFKDCDGHYLAPVGPAGTLKAGRNTRPGKDELFDLEESHPQVVLVAA-NH 268
            .....::.|:..|.||.:|..|.||:|:|....||: |::...:||||.||:|.||...:|. |.
  Fly   222 NEDCLFSAEYHGGHLALRDRQGQYLSPIGSKAVLKS-RSSSVTRDELFSLEDSLPQASFIAGLNL 285

Human   269 RYVSVRQGVNVSANQDDELDHETFLMQIDQETKKCTFYSSTGGYWTLVTHGGIHATATQVSANTM 333
            |||||:|||:|:||||:..::|||.::.|....:....::...||.|...|||.||..:..|:.:
  Fly   286 RYVSVKQGVDVTANQDEVGENETFQLEYDWSAHRWALRTTQDRYWCLSAGGGIQATGNRRCADAL 350

Human   334 FEMEWRG-RRVALKASNGRYVCMKKNGQLAAISDFVGPPPRPAWTGKVAGGAAQQTLSPPGKDEE 397
            ||:.|.| ..::.:|:||:::..|::|.|.|.|:.:         .::|               :
  Fly   351 FELIWHGDGSLSFRANNGKFLATKRSGHLFATSESI---------EEIA---------------K 391

Human   398 FTLKLINRPILVLRGLDGFVCHHR-GSNQLDTNRSVYDVFHLSFSD-GAYRIRGRDGGFW-YTGS 459
            |...|||||||||:...|||.:.. |:.:|:.|::.|:...:..:. |...::...|.:| ..|.
  Fly   392 FYFYLINRPILVLKCEQGFVGYRTPGNLKLECNKATYETILVERAQKGLVHLKAHSGKYWRIEGE 456

Human   460 HGSVCSDGERAEDFVFEFRERGRLAIRARSGKYLRGGASGLLRADADAPAGTALWEY 516
            ..||.:|.. ::.|..|.||..|:.||::.||||....:|..:...|.......||:
  Fly   457 SISVDADAP-SDGFFLELREPTRICIRSQQGKYLGATKNGAFKLLDDGTDSATQWEF 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FSCN2NP_001070650.1 Fascin 21..133 CDD:283843 49/113 (43%)
Fascin 138..254 CDD:238160 45/118 (38%)
Fascin 266..370 CDD:283843 39/105 (37%)
Fascin 414..516 CDD:283843 28/104 (27%)
snNP_001162697.1 Fascin 33..147 CDD:283843 49/114 (43%)
Fascin 152..270 CDD:238160 45/118 (38%)
Fascin 275..394 CDD:238160 44/142 (31%)
Fascin 399..512 CDD:238160 34/113 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165150924
Domainoid 1 1.000 114 1.000 Domainoid score I6090
eggNOG 1 0.900 - - E1_2CMA3
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22722
Inparanoid 1 1.050 358 1.000 Inparanoid score I2228
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52513
OrthoDB 1 1.010 - - D1419861at2759
OrthoFinder 1 1.000 - - FOG0002949
OrthoInspector 1 1.000 - - otm41025
orthoMCL 1 0.900 - - OOG6_104023
Panther 1 1.100 - - O PTHR10551
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4757
SonicParanoid 1 1.000 - - X1949
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.