DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prkar1a and Pka-R1

DIOPT Version :9

Sequence 1:NP_037313.1 Gene:Prkar1a / 25725 RGDID:3391 Length:381 Species:Rattus norvegicus
Sequence 2:NP_001189150.1 Gene:Pka-R1 / 40305 FlyBaseID:FBgn0259243 Length:464 Species:Drosophila melanogaster


Alignment Length:403 Identity:256/403 - (63%)
Similarity:294/403 - (72%) Gaps:38/403 - (9%)


- Green bases have known domain annotations that are detailed below.


  Rat    13 RSLRECELYVQKHNIQALLKDS---------------IVQLCTARPERP-----------MAFLR 51
            |.|||..:........|||:|.               :...||..||..           ....|
  Fly    66 RILRESSIDGGVAMFDALLRDDHEHRLSLDAVHRMRHVRTSCTTIPEEDAVSDRSLQIHLSTLAR 130

  Rat    52 EYFERLEKEEARQIQSLQKSGIRTDSREDEISP-------PPPNPVVKGRRRRGAISAEVYTEED 109
            |..:.||.|..|:    ::..::.|:....|||       |.|.......||||.||||..||||
  Fly   131 EREQELELERQRE----REEQVKLDASRQVISPDDCEDLSPMPQTAAPPVRRRGGISAEPVTEED 191

  Rat   110 AASYVRKVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNF 174
            |.:||:||:|||||||.||:|||.|||||:|||::||||||||||||:.||||.:||||||||||
  Fly   192 ATNYVKKVVPKDYKTMNALSKAIAKNVLFAHLDESERSDIFDAMFPVNHIAGENIIQQGDEGDNF 256

  Rat   175 YVIDQGEMDVYVNNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGST 239
            ||||.||:||:||:|..|::.||||||||||||||||||||:|||:|||||||||||||||||||
  Fly   257 YVIDVGEVDVFVNSELVTTISEGGSFGELALIYGTPRAATVRAKTDVKLWGIDRDSYRRILMGST 321

  Rat   240 LRKRKMYEEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGTAAVLQ 304
            :|||||||||||:|||||||||||||||||:||...|:||:.||.||..||:|:|||||.|.|||
  Fly   322 IRKRKMYEEFLSRVSILESLDKWERLTVADSLETCSFDDGETIVKQGAAGDDFYIILEGCAVVLQ 386

  Rat   305 RRSE-NEEFVEVGRLGPSDYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILKR 368
            :||| .|:..||||||.||||||||||::||||||||||||||||||||.|||||||||:|||||
  Fly   387 QRSEQGEDPAEVGRLGSSDYFGEIALLLDRPRAATVVARGPLKCVKLDRARFERVLGPCADILKR 451

  Rat   369 NIQQYNSFVSLSV 381
            ||.||||||||||
  Fly   452 NITQYNSFVSLSV 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prkar1aNP_037313.1 Dimerization and phosphorylation 2..136 54/155 (35%)
DD_RIalpha_PKA 14..63 CDD:213048 16/74 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..96 6/37 (16%)
Pseudophosphorylation motif 96..100 3/3 (100%)
CAP_ED 137..246 CDD:237999 89/108 (82%)
CAP_ED 255..370 CDD:237999 90/115 (78%)
Pka-R1NP_001189150.1 Crp 213..>339 CDD:223736 104/125 (83%)
CAP_ED 219..328 CDD:237999 89/108 (82%)
Crp 331..>442 CDD:223736 85/110 (77%)
CAP_ED 337..453 CDD:237999 90/115 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 138 1.000 Domainoid score I4721
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37664
Inparanoid 1 1.050 539 1.000 Inparanoid score I1144
OMA 1 1.010 - - QHG54324
OrthoDB 1 1.010 - - D1047290at2759
OrthoFinder 1 1.000 - - FOG0000531
OrthoInspector 1 1.000 - - otm45469
orthoMCL 1 0.900 - - OOG6_100449
Panther 1 1.100 - - LDO PTHR11635
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X421
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.880

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