DRSC/TRiP Functional Genomics Resources

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Protein Alignment NEGR1 and Negr1

DIOPT Version :10

Sequence 1:NP_776169.2 Gene:NEGR1 / 257194 HGNCID:17302 Length:354 Species:Homo sapiens
Sequence 2:XP_063138498.1 Gene:Negr1 / 59318 RGDID:708416 Length:423 Species:Rattus norvegicus


Alignment Length:355 Identity:310/355 - (87%)
Similarity:324/355 - (91%) Gaps:8/355 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     3 MMLLVQGACCSNQWLAAVLLSLCCLLPSCLPAGQSVDFPWAAVDNMMVRKGDTAVLRCYLEDGAS 67
            |:||.||||||||||||||||||    |||||||||||||||||||:||||||||||||||||||
  Rat     1 MVLLAQGACCSNQWLAAVLLSLC----SCLPAGQSVDFPWAAVDNMLVRKGDTAVLRCYLEDGAS 61

Human    68 KGAWLNRSSIIFAGGDKWSVDPRVSISTLNKRDYSLQIQNVDVTDDGPYTCSVQTQHTPRTMQVH 132
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    62 KGAWLNRSSIIFAGGDKWSVDPRVSISTLNKRDYSLQIQNVDVTDDGPYTCSVQTQHTPRTMQVH 126

Human   133 LTVQVPPKIYDISNDMTVNEGTNVTLTCLATGKPEPSISWRHISPSAKPFENGQYLDIYGITRDQ 197
            |||||||||||||||||:||||||||||||||||||:||||||||||||||||||||||||||||
  Rat   127 LTVQVPPKIYDISNDMTINEGTNVTLTCLATGKPEPAISWRHISPSAKPFENGQYLDIYGITRDQ 191

Human   198 AGEYECSAENDVSFPDVRKVKVVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEK 262
            |||||||||||||||||:||:||||||||||||||||||||||||||||||||||||||||||||
  Rat   192 AGEYECSAENDVSFPDVKKVRVVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEK 256

Human   263 KLFNGQQGIIIQNFSTRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLN----PPSTAQYGIT 323
            :||||||||||||||||||||||||||||||||||||||||||||||||||    |.:::.....
  Rat   257 RLFNGQQGIIIQNFSTRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNQIIEPTTSSPVTSP 321

Human   324 GSADVLFSCWYLVLTLSSFTSIFYLKNAIL 353
            |.....|:.:..||.|||..|....|::.|
  Rat   322 GQYPHTFTKYVWVLFLSSKISALSQKHSQL 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NEGR1NP_776169.2 IG_like 47..135 CDD:214653 86/87 (99%)
Ig strand B 56..60 CDD:409353 3/3 (100%)
Ig strand C 68..72 CDD:409353 3/3 (100%)
Ig strand E 101..105 CDD:409353 3/3 (100%)
Ig strand F 115..120 CDD:409353 4/4 (100%)
Ig strand G 128..131 CDD:409353 2/2 (100%)
Ig_3 138..207 CDD:464046 66/68 (97%)
IG_like 231..312 CDD:214653 79/80 (99%)
Ig strand B 241..245 CDD:409353 3/3 (100%)
Ig strand C 254..258 CDD:409353 3/3 (100%)
Ig strand E 280..284 CDD:409353 3/3 (100%)
Ig strand F 294..299 CDD:409353 4/4 (100%)
Negr1XP_063138498.1 None

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