| Sequence 1: | NP_776169.2 | Gene: | NEGR1 / 257194 | HGNCID: | 17302 | Length: | 354 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038958934.1 | Gene: | Negr1 / 59318 | RGDID: | 708416 | Length: | 362 | Species: | Rattus norvegicus |
| Alignment Length: | 366 | Identity: | 333/366 - (90%) |
|---|---|---|---|
| Similarity: | 340/366 - (92%) | Gaps: | 18/366 - (4%) |
- Green bases have known domain annotations that are detailed below.
|
Human 3 MMLLVQGACCSNQWLAAVLLSLCCLLPSCLPAGQSVDFPWAAVDNMMVRKGDTAVLRCYLEDGAS 67
Human 68 KGAWLNRSSIIFAGGDKWSVDPRVSISTLNKRDYSLQIQNVDVTDDGPYTCSVQTQHTPRTMQVH 132
Human 133 LTVQVPPKIYDISNDMTVNEGTNVTLTCLATGKPEPSISWRHISPSAKPFENGQYLDIYGITRDQ 197
Human 198 AGEYECSAENDVSFPDVRKVKVVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEK 262
Human 263 KLFNGQQGIIIQNFSTRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLN-------------- 313
Human 314 PPSTAQYGITGSADVLFSCWYLVLTLSSFTSIFYLKNAILQ 354 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| NEGR1 | NP_776169.2 | IG | 47..135 | CDD:214652 | 86/87 (99%) |
| IGc2 | 152..210 | CDD:197706 | 56/57 (98%) | ||
| Ig_3 | 225..301 | CDD:372822 | 74/75 (99%) | ||
| Negr1 | XP_038958934.1 | FR1 | 38..55 | CDD:409353 | 15/16 (94%) |
| Ig strand A' | 40..46 | CDD:409353 | 4/5 (80%) | ||
| IG_like | 41..129 | CDD:214653 | 86/87 (99%) | ||
| Ig strand B | 48..56 | CDD:409353 | 7/7 (100%) | ||
| CDR1 | 56..60 | CDD:409353 | 3/3 (100%) | ||
| FR2 | 61..68 | CDD:409353 | 6/6 (100%) | ||
| Ig strand C | 61..67 | CDD:409353 | 5/5 (100%) | ||
| CDR2 | 69..79 | CDD:409353 | 9/9 (100%) | ||
| Ig strand C' | 71..74 | CDD:409353 | 2/2 (100%) | ||
| Ig strand C' | 76..79 | CDD:409353 | 2/2 (100%) | ||
| FR3 | 80..115 | CDD:409353 | 34/34 (100%) | ||
| Ig strand D | 84..91 | CDD:409353 | 6/6 (100%) | ||
| Ig strand E | 94..100 | CDD:409353 | 5/5 (100%) | ||
| Ig strand F | 107..115 | CDD:409353 | 7/7 (100%) | ||
| CDR3 | 116..120 | CDD:409353 | 3/3 (100%) | ||
| Ig strand G | 120..129 | CDD:409353 | 8/8 (100%) | ||
| FR4 | 122..129 | CDD:409353 | 6/6 (100%) | ||
| Ig strand A' | 139..144 | CDD:409353 | 4/4 (100%) | ||
| IGc2 | 146..204 | CDD:197706 | 56/57 (98%) | ||
| Ig strand B | 150..157 | CDD:409353 | 6/6 (100%) | ||
| Ig strand C | 163..168 | CDD:409353 | 3/4 (75%) | ||
| Ig strand C' | 170..172 | CDD:409353 | 1/1 (100%) | ||
| Ig strand E | 180..186 | CDD:409353 | 5/5 (100%) | ||
| Ig strand F | 193..200 | CDD:409353 | 6/6 (100%) | ||
| Ig strand G | 207..215 | CDD:409353 | 5/7 (71%) | ||
| Ig_3 | 219..295 | CDD:404760 | 74/75 (99%) | ||
| putative Ig strand A | 219..225 | CDD:409353 | 5/5 (100%) | ||
| Ig strand B | 235..239 | CDD:409353 | 3/3 (100%) | ||
| Ig strand C | 248..252 | CDD:409353 | 3/3 (100%) | ||
| Ig strand E | 274..278 | CDD:409353 | 3/3 (100%) | ||
| Ig strand F | 288..293 | CDD:409353 | 4/4 (100%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83677595 | |
| Domainoid | 1 | 1.000 | 187 | 1.000 | Domainoid score | I26070 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H41447 | |
| Inparanoid | 1 | 1.050 | 684 | 1.000 | Inparanoid score | I9015 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG43105 | |
| OrthoDB | 1 | 1.010 | - | - | D125599at9347 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000150 | |
| OrthoInspector | 1 | 1.000 | - | - | oto132675 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_112728 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR42757 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X97 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 16 | 16.410 | |||||