DRSC/TRiP Functional Genomics Resources

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Protein Alignment NEGR1 and DIP-delta

DIOPT Version :9

Sequence 1:NP_776169.2 Gene:NEGR1 / 257194 HGNCID:17302 Length:354 Species:Homo sapiens
Sequence 2:NP_001097508.2 Gene:DIP-delta / 5740816 FlyBaseID:FBgn0085420 Length:469 Species:Drosophila melanogaster


Alignment Length:310 Identity:91/310 - (29%)
Similarity:127/310 - (40%) Gaps:43/310 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    45 VDNMMVRKGDTAVLRCYLED-GASKGAW--LNRSSIIFAGGDKWSVDPRVSISTLNKRDYSLQIQ 106
            :.|:.|..|..|.|.|.:|. |..|.||  ::|..|:.......|..||.|| |.....:.|.:.
  Fly    50 IPNVTVAVGRDANLPCVVEHLGGYKVAWIHIDRQMILTIHRHVISRIPRYSI-TYTDNTWLLHVN 113

Human   107 NVDVTDDGPYTCSVQTQHTPRTMQV-HLTVQVPPKIYDIS---NDMTVNEGTNVTLTCLATGKPE 167
            .....|.|.|.|.|.|  .|...|| :|.|.|||.|.||.   :.:.|.|..|:.:||.|.|.|.
  Fly   114 QAHQDDRGYYMCQVNT--NPMISQVGYLQVVVPPNILDIESTPSSVAVRENQNINMTCRADGFPA 176

Human   168 PSISWRHISPSAKPFENGQYLDIYG--------ITRDQAGEYECSAENDVSFPDV-RKVKVVVNF 223
            |.|.||.........|..:.:.:|.        ::|::.|.|.|.|.|.|. |.| :::.:.|.|
  Fly   177 PKIIWRREDGEEIAVEKKKKVLVYDADVLPLTKVSRNEMGAYLCIATNGVP-PSVSKRIILDVEF 240

Human   224 APTIQEIKSGTVTP-GRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST--------- 278
            :|.|.........| |....|.|.....|.....|      ::|....:..:.:.|         
  Fly   241 SPMIWVPNQLVGAPSGTDVTIDCHTEAHPKAIIYW------VYNSVMVLPSKKYKTDYTENSYRA 299

Human   279 RSILTVTNVTQEHFGNYTCVAANKLGTTNAS-----LPLNPPSTAQYGIT 323
            ...||:.|:....||||.|::.|.||.|..|     :||  |||....:|
  Fly   300 HMKLTIRNLQYGDFGNYRCISKNSLGETEGSIRVYEIPL--PSTPSKQVT 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NEGR1NP_776169.2 IG 47..135 CDD:214652 30/91 (33%)
IGc2 152..210 CDD:197706 19/65 (29%)
Ig_3 225..301 CDD:372822 18/85 (21%)
DIP-deltaNP_001097508.2 IG 51..143 CDD:214652 31/94 (33%)
Ig 145..238 CDD:416386 27/93 (29%)
Ig strand A 145..149 CDD:409353 2/3 (67%)
Ig strand A' 154..159 CDD:409353 0/4 (0%)
Ig strand B 165..172 CDD:409353 2/6 (33%)
Ig strand C 178..183 CDD:409353 2/4 (50%)
Ig strand C' 185..187 CDD:409353 0/1 (0%)
Ig strand D 195..199 CDD:409353 0/3 (0%)
Ig strand E 203..209 CDD:409353 0/5 (0%)
Ig strand F 216..223 CDD:409353 3/6 (50%)
Ig strand G 230..238 CDD:409353 1/7 (14%)
Ig 242..333 CDD:416386 23/96 (24%)
Ig strand A' 250..253 CDD:409353 0/2 (0%)
Ig strand B 259..266 CDD:409353 2/6 (33%)
Ig strand C 272..277 CDD:409353 1/10 (10%)
Ig strand C' 281..283 CDD:409353 0/1 (0%)
Ig strand D 289..293 CDD:409353 1/3 (33%)
Ig strand E 295..305 CDD:409353 1/9 (11%)
Ig strand F 314..322 CDD:409353 4/7 (57%)
Ig strand G 325..334 CDD:409353 3/8 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I12195
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - mtm8497
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.820

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