DRSC/TRiP Functional Genomics Resources

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Protein Alignment NEGR1 and CG34353

DIOPT Version :9

Sequence 1:NP_776169.2 Gene:NEGR1 / 257194 HGNCID:17302 Length:354 Species:Homo sapiens
Sequence 2:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster


Alignment Length:318 Identity:92/318 - (28%)
Similarity:146/318 - (45%) Gaps:43/318 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    37 SVDFPWAAVDNMMVRK---------------GDTAVLRCYLED-GASKGAWLNRSSIIFAGGDKW 85
            |:.|...:..:||.:.               |:|.||.|.:.: .....||....:|:.||..|.
  Fly    69 SLHFESVSAQSMMTKNEPMFISRSETFKFITGETIVLPCEVANTDTYVVAWKRGIAILTAGSVKV 133

Human    86 SVDPRVSISTLNKRDYSLQIQNVDVTDDGPYTCSVQTQHTPRTMQVHLTVQVPPKIYDIS--NDM 148
            :.||||.:    ...::|||::...||.|.|.|.:.|. .||.:...:.:.|||:|:.||  ..:
  Fly   134 TPDPRVRL----VNGFNLQIRDALPTDAGDYICQIATM-DPREITHTVEILVPPRIHHISTGGHL 193

Human   149 TVNEGTNVTLTCLATGKPEPSISW---RHISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVS 210
            .|.:|::|.:.|.|||.|.|:::|   .:|.|:.:...:...|.|..:.|.:.|.|.|:|.|.|.
  Fly   194 QVKKGSSVRIECSATGNPMPNVTWSRKNNILPNGEEKLHSHVLSIENVDRHKGGVYICTANNRVG 258

Human   211 FPDVRKVKVVVNFAPTIQ----EIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGI 271
            .|...:|.:.|.|:|.|.    .:.||   .|....:.|...|...|...|:|...:|...::. 
  Fly   259 QPASSQVVLHVLFSPEISVERPVVFSG---EGHEATLVCIVHGETQPEVIWFKDTMQLDTTERH- 319

Human   272 IIQNFSTRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPL---------NPPSTAQY 320
            |::...:|..|.:..|..:.||||:|||.|:||....:|.|         |.|..:||
  Fly   320 IMETRGSRHTLIIRKVHPQDFGNYSCVAENQLGKARKTLQLSGKPNVAVFNSPPISQY 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NEGR1NP_776169.2 IG 47..135 CDD:214652 28/103 (27%)
IGc2 152..210 CDD:197706 19/60 (32%)
Ig_3 225..301 CDD:372822 22/79 (28%)
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 26/84 (31%)
Ig 103..177 CDD:143165 24/78 (31%)
IG_like 191..269 CDD:214653 23/77 (30%)
IGc2 198..258 CDD:197706 19/59 (32%)
I-set 273..360 CDD:254352 26/90 (29%)
Ig 290..359 CDD:143165 20/69 (29%)
FN3 <466..524 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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