DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gucy2c and Gyc76C

DIOPT Version :9

Sequence 1:NP_037302.1 Gene:Gucy2c / 25711 RGDID:2771 Length:1072 Species:Rattus norvegicus
Sequence 2:NP_001163473.1 Gene:Gyc76C / 8674026 FlyBaseID:FBgn0266136 Length:1525 Species:Drosophila melanogaster


Alignment Length:1199 Identity:340/1199 - (28%)
Similarity:521/1199 - (43%) Gaps:291/1199 - (24%)


- Green bases have known domain annotations that are detailed below.


  Rat    56 AVEEGLDIVRK---RLREAELNVTVNATFIYSDGLIHKSGDCRSST-------CEGLDLLREITR 110
            |:...||.|.|   .|....|::..|.|          .||...:|       |:|:        
  Fly    49 ALTMALDEVNKDPNLLPNVYLDLRWNDT----------KGDTVLATKAITEMICDGI-------- 95

  Rat   111 DRKMGCVLMGPS--CTYSTFQMYLDTELNYPMISAGSFGLSC-DYK----ETLTRILPPARKLMY 168
                 ..:.||.  |   ..:..:....|.||||     ..| :|:    .|..|..||..:::.
  Fly    96 -----ATIFGPEGPC---YVEAIVSQSRNIPMIS-----YKCAEYRASAIPTFARTEPPDTQVVK 147

  Rat   169 FLVDFWKVNNAPFKTFSWNS-SYVYKNGSEPE--------------------------------- 199
            .|:       |..:.::||. |.:|::...|.                                 
  Fly   148 SLL-------ALLRYYAWNKFSILYEDVWSPVADLLKDQATKRNMTINHKQSFIDNRVKCCEQML 205

  Rat   200 DC----FWY---------------LNALEAGVSYFSE------------VLSFKDVLRRSEQFQE 233
            ||    :||               |.|..:.|.:.|.            ::.|.|::..||:..|
  Fly   206 DCCRSGYWYQLVQNTMNRTRIYVFLGAANSLVDFMSSMETAGLFARGEYMVIFVDMMVYSEREAE 270

  Rat   234 ILMGRNRKSNVIVMCGTPETFYNVKGDLKVADDTVVILVDLFSNHYFEDDTRAPEYMDNVLVLTL 298
            ..:.|..:...:..|.:.|.|..:...|.|...|..      :..|.:...:..:|...      
  Fly   271 KYLRRVDQITFMSNCHSTENFNQMARSLLVVASTPP------TKDYIQFTKQVQKYSSK------ 323

  Rat   299 PPEKF-IANASVSGRFPSERSDFSLAYLEGTLLFGHMLQTFLENGESVTTPK--FARA------- 353
            ||... |....|...|....|.::....:...|:...:...|.....|.|..  |..|       
  Fly   324 PPFNLEIPRLFVESNFSKFISIYAAYLYDSVKLYAWAVDKMLREETRVLTDDVIFEVASNGTRVI 388

  Rat   354 ---FRNLTFQGLEG-PVTLDDSGDIDNIMCLLYVSLDTRKYKVLMAYDTHK-NQT---------I 404
               .:|.|:..:.| .:.:|..||.:.            .:.|| ||..|| |.:         :
  Fly   389 DTIIKNRTYMSITGSKIKIDQYGDSEG------------NFSVL-AYKPHKWNNSNNMPCNYHMV 440

  Rat   405 PVA------TSPNFIWKNHRL--------PNDVPGLGPQILMIAVF--------------TLTGI 441
            |||      ..|.:...|..:        |.|.|..|        |              |:..:
  Fly   441 PVAYFHQGEEHPEYKLINGSIDWPSGGEKPADEPMCG--------FANELCKKDDTHYTSTVAAV 497

  Rat   442 VVVLLL-----IALLVLRKYRRDHELRQKKWSHIPSENIFPLETNE----TNHVSLK-------- 489
            |:.:||     |.:.:.||::.:.|:....|...|:| |.....||    .:.|||.        
  Fly   498 VLGVLLFCSGVITMSIYRKWKIELEIEGLLWKIDPNE-IKGYSGNEIVSSPSKVSLMSAQSYGSR 561

  Rat   490 ------IDDDRRRDTIQRVRQCKYDKKKVILKDLKHCDGNFSEKQKIELNKLLQSDYYNLTKFYG 548
                  ....|.|..:.|:::.|:.:|:.|.:::         .:::.|.:.|:.|  |:..|.|
  Fly   562 WTNQFVTSTGRLRGAVVRIKELKFPRKRDISREI---------MKEMRLLRELRHD--NINSFIG 615

  Rat   549 TVKLDTRIFGVVEYCERGSLREVL-NDTISYPDGTFMDWEFKISVLNDIAKGMSYLHSSKIEVHG 612
            .....|||..|.:||.:|||.::: |:.|.      :|..|..|:::|:.|||.|:|:|::..||
  Fly   616 ASVEPTRILLVTDYCAKGSLYDIIENEDIK------LDDLFIASLIHDLIKGMIYIHNSQLVYHG 674

  Rat   613 RLKSTNCVVDSRMVVKITDFGCNSILP------------PKKDLWTAPEHLRQATI-SQKGDVYS 664
            .|||:||||.||.::::||||.:.:..            .:..||.|||.||.... |||||||:
  Fly   675 NLKSSNCVVTSRWMLQVTDFGLHELRQCAENESIGEHQHYRNQLWRAPELLRNHIHGSQKGDVYA 739

  Rat   665 FSIIAQEIILRKETFYTLSCRDQNEKIFRVEN--SYGTKPFRPDLFLETADEKE-LEVYLL--VK 724
            |:||..||..||..|..::. :..|.:..|:.  ..|..||||:  :|:..|.| ...|:|  ::
  Fly   740 FAIIMYEIFSRKGPFGQINF-EPKEIVDYVKKLPLKGEDPFRPE--VESIIEAESCPDYVLACIR 801

  Rat   725 SCWEEDPEKRPDFKKIESTLAKIFGLFHDQKNESYMDTLIRRLQLYSRNLEHLVEERTQLYKAER 789
            .||.||||:||:|..|.:.|.|:.|    .|.::.||.::..::.|:.|||.:|.|||:|...|:
  Fly   802 DCWAEDPEERPEFSVIRNRLKKMRG----GKTKNIMDQMMEMMEKYANNLEDIVTERTRLLCEEK 862

  Rat   790 DRADHLNFMLLPRLVVKSLKEKGIVEPELYEEVTIYFSDIVGFTTICKYSTPMEVVDMLNDIYKS 854
            .:.:.|...:||:.|.:.|.....|||..|:.||||||||||||.:...|||::||:.|||:|..
  Fly   863 MKTEDLLHRMLPQSVAEKLTMGQGVEPVSYDLVTIYFSDIVGFTAMSAESTPLQVVNFLNDLYTV 927

  Rat   855 FDQIVDHHDVYKVETIGDAYVVASGLPMRNGNRHAVDISKMALDILSFMGTFELEHLPGLPVWIR 919
            ||:|:..:||||||||||||:|.||||::||:|||.:|:.|||::|..:....:.|.|...:.:|
  Fly   928 FDRIIRGYDVYKVETIGDAYMVVSGLPIKNGDRHAGEIASMALELLHAVKQHRIAHRPNETLKLR 992

  Rat   920 IGVHSGPCAAGVVGIKMPRYCLFGDTVNTASRMESTGLPLRIHMSSSTIAILRRTDCQFLYEVRG 984
            ||:|:||..|||||:.|||||||||||||||||||.|..|:||:|:.....|.:....::.|.||
  Fly   993 IGMHTGPVVAGVVGLTMPRYCLFGDTVNTASRMESNGEALKIHISNKCKLALDKLGGGYITEKRG 1057

  Rat   985 ETYLKGRGTETTYWLTGMKDQEYN------LPTPPTVENQQRLQTEFS-DMIVSALQKRQASGVK 1042
            ...:||:|...|:||||..:....      :..||.:.::.|...:.: |....::|.....|..
  Fly  1058 LVNMKGKGDVVTWWLTGANENAIQKKLVDMMDMPPPLFSRPRKSPKLNPDSRQPSIQAMHFCGTG 1122

  Rat  1043 SRRPTRVASYKKGFLEYMQLNNSDHDSTY 1071
            |||.:.|.            ...|.:|||
  Fly  1123 SRRQSTVP------------RAMDGESTY 1139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gucy2cNP_037302.1 Periplasmic_Binding_Protein_Type_1 34..414 CDD:299141 86/469 (18%)
PKc_like 479..749 CDD:304357 99/306 (32%)
STYKc 501..744 CDD:214568 90/261 (34%)
CYCc 787..978 CDD:214485 99/190 (52%)
Guanylate_cyc 814..1001 CDD:278633 102/186 (55%)
Gyc76CNP_001163473.1 PBP1_Speract_GC_like 26..445 CDD:107365 85/458 (19%)
ANF_receptor 48..412 CDD:279440 73/412 (18%)
PK_GC-A_B 543..827 CDD:270944 98/307 (32%)
HNOBA <835..881 CDD:285003 14/45 (31%)
CYCc 860..1052 CDD:214485 99/191 (52%)
Guanylate_cyc 887..1074 CDD:278633 102/186 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.