DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp3 and CG18327

DIOPT Version :9

Sequence 1:NP_037299.1 Gene:Ucp3 / 25708 RGDID:3933 Length:308 Species:Rattus norvegicus
Sequence 2:NP_001260966.1 Gene:CG18327 / 36567 FlyBaseID:FBgn0033904 Length:304 Species:Drosophila melanogaster


Alignment Length:292 Identity:83/292 - (28%)
Similarity:138/292 - (47%) Gaps:19/292 - (6%)


- Green bases have known domain annotations that are detailed below.


  Rat    17 FLGAGTAACFADLLTFPLDTAKVRLQIQGE--NPGVQSVQYRGVLGTILTMVRTEGPRSPYSGLV 79
            |:..|.||..|.:.|.|::..|.|:|:|||  ..|..:..|:.|....:|:.:.:|......||.
  Fly     6 FVLGGVAAMGAGVFTNPVEVIKTRIQLQGELAARGSHAQPYKSVFQAFVTVAKNDGILGLQKGLA 70

  Rat    80 AGLHRQMSFASIRIGLYDSVKQFYTPKGTDHS-----SVAIRILAGCTTGAMAVTCAQPTDVVKV 139
            ..|..|....|.|:.:|....:    ||..|:     |.|..:..|...|.:...||.|..::|.
  Fly    71 PALCFQFVINSFRLSIYTHAVE----KGWVHNNKGEISFAKGMFWGALGGVVGSYCASPFFLIKT 131

  Rat   140 RFQAMI--RLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMVTYDIIKEK 202
            :.||..  ::..|.:.::....||.|.|.|:.||.|||:|:..|::|..:.:..::..:...|..
  Fly   132 QLQAQAAKQIAVGYQHQHASMSDAIRKIYRKNGVFGLWRGSLANVSRATVASAVQIAVFGQAKSL 196

  Rat   203 LLDSHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNA---PPGR---YRSPLHCMLRMVA 261
            |.::.:.|......|.|...||...::..:|:|||.||..|.   ..||   ||..|.|:|.::.
  Fly   197 LKENGVVTHPTILSFCSGLAAGSFVSLAITPLDVVTTRLYNQGVDAQGRGIYYRGWLDCVLTILR 261

  Rat   262 QEGPTAFYKGFMPSFLRLGSWNVMMFVTYEQL 293
            .||....||||.|.:||...::.::.:.:::|
  Fly   262 SEGVYGLYKGFWPIYLRSAPYSTLVLLFFDEL 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp3NP_037299.1 Mito_carr 10..107 CDD:278578 25/91 (27%)
Solcar 1 11..102 25/86 (29%)
PTZ00169 13..298 CDD:240302 83/292 (28%)
Mito_carr 109..206 CDD:278578 27/103 (26%)
Solcar 2 111..202 25/97 (26%)
Mito_carr 209..299 CDD:278578 29/91 (32%)
Solcar 3 211..296 28/89 (31%)
Purine nucleotide binding. /evidence=ECO:0000250 275..297 3/19 (16%)
CG18327NP_001260966.1 Mito_carr 4..87 CDD:278578 24/80 (30%)
PTZ00169 5..293 CDD:240302 82/290 (28%)
Mito_carr 101..201 CDD:278578 26/99 (26%)
Mito_carr 204..296 CDD:278578 29/90 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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