DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mep1a and tld

DIOPT Version :9

Sequence 1:NP_037275.1 Gene:Mep1a / 25684 RGDID:3080 Length:748 Species:Rattus norvegicus
Sequence 2:NP_524487.2 Gene:tld / 42945 FlyBaseID:FBgn0003719 Length:1067 Species:Drosophila melanogaster


Alignment Length:812 Identity:184/812 - (22%)
Similarity:281/812 - (34%) Gaps:218/812 - (26%)


- Green bases have known domain annotations that are detailed below.


  Rat    23 IQHLSTGHDHDDVDVGEQQKDISEINSAAGLNL--------FQGDIL------------LPRTRN 67
            |..|.|...|.    |.::|...:..:.|.|.|        ...|:|            :.|.|.
  Fly    76 IYQLKTTRQHS----GRRRKQSHKSQNKAALRLPPPFLWTDDAVDVLQHSHSPTLNGQPIQRRRR 136

  Rat    68 ALRDPSSR-WK-PPIPYILADNLDLNAKGAI----LNAFEMFRLKSCVDFKPYEG--ESSYIIFQ 124
            |:.....| |. ..|||.: |.:...|..|:    :..:|.|   :|:.|...:.  .::||.|.
  Fly   137 AVTVRKERTWDYGVIPYEI-DTIFSGAHKALFKQAMRHWENF---TCIKFVERDPNLHANYIYFT 197

  Rat   125 -QFSGCWSMVGDQHVG-QNISIGEGCDYKAIIEHEILHALGFFHEQSRTDRDDYVNIWWNEIMTD 187
             :..||.|.:|....| |.||||..|:...||.||:.|.:||.||.:|.|||.::.|....||..
  Fly   198 VKNCGCCSFLGKNGNGRQPISIGRNCEKFGIIIHELGHTIGFHHEHARGDRDKHIVINKGNIMRG 262

  Rat   188 YEHNFNTYDDKTITDLNTPYDYESLMHYGPFSFNKNETIPTIT-TKIPEFNAI-IGQRLDFSATD 250
            .|:||:....:.:.....|||..|:|||...||:|:..:.||| ..||....: :|||...|..|
  Fly   263 QEYNFDVLSPEEVDLPLLPYDLNSIMHYAKNSFSKSPYLDTITPIGIPPGTHLELGQRKRLSRGD 327

  Rat   251 LTRLNRMYNCT---RT------HTLLDHCAFEKTNICGMIQGTRDDADWVHEDSSQPGQVDHTLV 306
            :.:.|.:|.|.   ||      |.:..|..:....:....:|:.|    ..||.|...:.|.:|.
  Fly   328 IVQANLLYKCASCGRTYQQNSGHIVSPHFIYSGNGVLSEFEGSGD----AGEDPSAESEFDASLT 388

  Rat   307 GRCKAAGYFMYFNTSSGVTGEVALLESRILYPKRKQQCLQFFYKMTGSPSDRLLIW-----VRRD 366
             .|:.        ..:...||..:|..:.|:......|.|.:.::...      .|     ||| 
  Fly   389 -NCEW--------RITATNGEKVILHLQQLHLMSSDDCTQDYLEIRDG------YWHKSPLVRR- 437

  Rat   367 DNTGNVR-QLAKIQTFQGDSDHNWKIAHVTLNEEKKFRYVFQGTKGDPGNSDGGIYLDDITLTE- 429
             ..|||. ::...||      ....:.:|..|..|.:|    |.|.......||    |:.||: 
  Fly   438 -ICGNVSGEVITTQT------SRMLLNYVNRNAAKGYR----GFKARFEVVCGG----DLKLTKD 487

  Rat   430 ------------TPCPTGVWTIRNISQVLENTVKGDRLVSPRFYNSE-------GYGF------- 468
                        .|....||.|         |...:..|:.:|.:.|       .|.|       
  Fly   488 QSIDSPNYPMDYMPDKECVWRI---------TAPDNHQVALKFQSFELEKHDGCAYDFVEIRDGN 543

  Rat   469 -----------GVTLYPNGRITSNSGYLGLAFHLYSGDNDVILEWPVENEQAIMTILDQEPDARN 522
                       |..|.||.:..||..|:     .:..|:.|   ..:....|:|..:|:.....:
  Fly   544 HSDSRLIGRFCGDKLPPNIKTRSNQMYI-----RFVSDSSV---QKLGFSAALMLDVDECKFTDH 600

  Rat   523 RMSLSLMFTTSKYQ------------------------TSSAINGSVIWDRPTKVGVYDKDCDCF 563
            ......:.|...||                        .::..|||:.  .|:...||.....|.
  Fly   601 GCQHLCINTLGSYQCGCRAGYELQANGKTCEDACGGVVDATKSNGSLY--SPSYPDVYPNSKQCV 663

  Rat   564 RSIDWGWGQAISHQMLM----------RRNFLK--DDTLIIFVDFKDLTHLRQTEVPISSRSVIP 616
                |......:|.:.:          |.::.|  .|.|||:...:|   .|..::.|.....:|
  Fly   664 ----WEVVAPPNHAVFLNFSHFDLEGTRFHYTKCNYDYLIIYSKMRD---NRLKKIGIYCGHELP 721

  Rat   617 RGLLLQGQEPLALGDSRIAMMEESLPRRLDQRQPSRPKRSVENTGPMEDHNWPQYFRDPCDPN-- 679
                     |:...:..|..:|....|.: ||.....|..::              .|.|..|  
  Fly   722 ---------PVVNSEQSILRLEFYSDRTV-QRSGFVAKFVID--------------VDECSMNNG 762

  Rat   680 PCQNEGTCVNVKGMASCRCVSGHAFFYTGERC 711
            .||:.  |.|..|...|.|.:|:.....|..|
  Fly   763 GCQHR--CRNTFGSYQCSCRNGYTLAENGHNC 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mep1aNP_037275.1 ZnMc 32..260 CDD:294052 78/259 (30%)
Astacin 75..261 CDD:279708 67/197 (34%)
MAM 270..433 CDD:279023 35/181 (19%)
MAM 270..432 CDD:99706 34/180 (19%)
MATH 432..596 CDD:295307 39/224 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 641..668 4/26 (15%)
EGF 676..710 CDD:278437 11/35 (31%)
tldNP_524487.2 ZnMc_BMP1_TLD 137..338 CDD:239808 68/204 (33%)
Astacin 144..339 CDD:279708 68/198 (34%)
CUB 388..474 CDD:214483 22/112 (20%)
CUB 478..586 CDD:278839 24/128 (19%)
FXa_inhibition 595..630 CDD:291342 3/34 (9%)
CUB 634..750 CDD:278839 25/134 (19%)
FXa_inhibition 757..792 CDD:291342 11/36 (31%)
CUB 797..906 CDD:278839
CUB 910..1023 CDD:278839
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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