Sequence 1: | XP_006255456.1 | Gene: | Smad1 / 25671 | RGDID: | 3030 | Length: | 483 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259992.1 | Gene: | Mad / 33529 | FlyBaseID: | FBgn0011648 | Length: | 525 | Species: | Drosophila melanogaster |
Alignment Length: | 484 | Identity: | 348/484 - (71%) |
---|---|---|---|
Similarity: | 380/484 - (78%) | Gaps: | 52/484 - (10%) |
- Green bases have known domain annotations that are detailed below.
Rat 5 SLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPR 69
Rat 70 SLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPV 134
Rat 135 LPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPHSHPFPQSPNSSYPNSPGSS 199
Rat 200 SSTYPHSPTS--SDPGSPFQMPADTPPPAYLPPEDPMA---QDGSQPMDTNMTNMTAPTLPAEIN 259
Rat 260 RGGEVSCRSPCESLLSADVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNK 324
Rat 325 NRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTV 389
Rat 390 CKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWI 454
Rat 455 EIHLHGPLQWLDKVLTQMGSPHNPISSVS 483 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Smad1 | XP_006255456.1 | MH1_SMAD_1_5_9 | 9..132 | CDD:199814 | 111/122 (91%) |
PRK10263 | <133..>244 | CDD:236669 | 50/115 (43%) | ||
MH2_SMAD_1_5_9 | 283..483 | CDD:199822 | 174/199 (87%) | ||
Mad | NP_001259992.1 | MH1_SMAD_1_5_9 | 93..216 | CDD:199814 | 111/122 (91%) |
MH2_SMAD_1_5_9 | 325..525 | CDD:199822 | 174/199 (87%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 322 | 1.000 | Domainoid score | I1179 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3701 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H21196 | |
Inparanoid | 1 | 1.050 | 701 | 1.000 | Inparanoid score | I638 |
OMA | 1 | 1.010 | - | - | QHG48637 | |
OrthoDB | 1 | 1.010 | - | - | D274383at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000630 | |
OrthoInspector | 1 | 1.000 | - | - | otm44661 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103959 | |
Panther | 1 | 1.100 | - | - | O | PTHR13703 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X373 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.880 |