Sequence 1: | XP_011519732.1 | Gene: | GABRG3 / 2567 | HGNCID: | 4088 | Length: | 473 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
Alignment Length: | 567 | Identity: | 152/567 - (26%) |
---|---|---|---|
Similarity: | 238/567 - (41%) | Gaps: | 165/567 - (29%) |
- Green bases have known domain annotations that are detailed below.
Human 44 DTDVTLILNKLLREYDKKLRPDIGIKPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTDSRLR 108
Human 109 FNST--MKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLTINAEC 171
Human 172 QLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFMGLRNTTEIVTTS 236
Human 237 AGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLST 301
Human 302 IARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCRKPTTTKKTTSLLHPDSSRWIPE 366
Human 367 RISLQAPSV----RIALQNYSLLD------MRPPPTAMI-------------------------- 395
Human 396 -------------------------TLNNSVYWQEFEDTCVYECLDGKDCQSFFCCYEE------ 429
Human 430 -----CKSGSWRK----GR--------------------------------------------IH 441
Human 442 ---------------IDILELDSYSRVFFPTSFLLFNLVYWVGYLYL 473 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GABRG3 | XP_011519732.1 | Neur_chan_LBD | 48..253 | CDD:280998 | 67/206 (33%) |
LIC | 50..470 | CDD:273305 | 149/556 (27%) | ||
Neur_chan_memb | 260..467 | CDD:280999 | 75/341 (22%) | ||
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 57/182 (31%) |
Neur_chan_memb | 274..588 | CDD:397193 | 75/341 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |