DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Selp and CG7763

DIOPT Version :9

Sequence 1:	NP_037246.2	Gene:	Selp / 25651	RGDID:	3656	Length:	768	Species:	Rattus norvegicus
Sequence 2:	NP_001356891.1	Gene:	CG7763 / 36235	FlyBaseID:	FBgn0040503	Length:	232	Species:	Drosophila melanogaster

Alignment Length:	142	Identity:	31/142 - (21%)
Similarity:	63/142 - (44%)	Gaps:	11/142 - (7%)

- Green bases have known domain annotations that are detailed below.

  Rat    22 QLVWLSALISELVNQKEV-----AAWTYNYSTKAYSWNNSRAFCKRHFTDLVAIQNKNEIAHLND 81
            ||:.....:...:.:.|:     :.:.|....:..:|:::...|.:....|.::|::.|:...|:
  Fly    91 QLLTHGTAMGRKLEENEIFQQLGSKYYYIEKEEKLNWHDALDKCHKMGGHLASLQSQEELDRFNN 155

  Rat    82 VIPYVNSYYWIGIRKINNKWTWVGTNKTLTAEAENWADNEPNNKRNNQDCVEIYIKSNSAPGKWN 146
            .:..:|. |||.:....|:..:|...|...|...:|||.||.   .:.:||:  |::.:.....|
  Fly   156 QLNGLNR-YWIDVTNQFNESEFVSVTKGSKANFLSWADGEPT---KDGECVD--IRTFNGKTTMN 214

  Rat   147 DEPCFKRKRALC 158
            |..||.....:|
  Fly   215 DNSCFANLYFIC 226

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Selp	NP_037246.2	CLECT_selectins_like	42..160	CDD:153062	28/117 (24%)
		EGF_CA	<168..195	CDD:238011
		CCP	200..258	CDD:153056
		PHA02927	276..505	CDD:222943
		PHA02927	443..699	CDD:222943
		Endocytosis signal. /evidence=ECO:0000305	756..759
		Interaction with SNX17. /evidence=ECO:0000250	759..768
CG7763	NP_001356891.1	CLECT	116..228	CDD:153057	28/117 (24%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910