DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp3a23-3a1 and Cyp6a17

DIOPT Version :9

Sequence 1:NP_037237.2 Gene:Cyp3a23-3a1 / 25642 RGDID:628626 Length:502 Species:Rattus norvegicus
Sequence 2:NP_001286433.1 Gene:Cyp6a17 / 45556 FlyBaseID:FBgn0015714 Length:501 Species:Drosophila melanogaster


Alignment Length:498 Identity:162/498 - (32%)
Similarity:265/498 - (53%) Gaps:47/498 - (9%)


- Green bases have known domain annotations that are detailed below.


  Rat    14 LLAVVLVLLYGFGTRTHGLFKKQGIPGPKPLPFFGTV-------------LNYYMGLWKFDVECH 65
            |:.|:|.||.....|.||.::::|||..:..|.||.:             .:||.          
  Fly     6 LIVVILSLLVFAARRRHGYWQRRGIPHDEVHPLFGNIKDWPNKRHIAEIFRDYYF---------- 60

  Rat    66 KKYGKIWGLFDGQMPLF----AITDTEMIKNVLVKECFSVFTNRRDF-----GPVGIMGKAISVS 121
             ||......|.|....|    .:||.|::|.||:|: |:.|.||..|     .|   :...:...
  Fly    61 -KYKNSDYPFAGFFFFFTRTAVVTDMELLKRVLIKD-FNHFENRGVFYNEIDDP---LSATLFSI 120

  Rat   122 KDEEWKRYRALLSPTFTSGRLKEMFPVIEQYGDILVKYLRQ----EKGKPVPVKEVFGAYSMDVI 182
            :.::|:..|..|:||||||::|.|||::.:.|:.:.|..|.    ::|:.:.|.::...|:.|||
  Fly   121 EGQKWRHLRHKLTPTFTSGKMKNMFPIVVKVGEEMDKVFRSKTAADRGQVLEVVDLVARYTADVI 185

  Rat   183 TSTSFGVNVDSLNNPKDPFVEKAKKLLRIDFFDPLFLSVVLFPFLTPVYEMLNICMFPKDSIEFF 247
            .:.:||:|.:||.:||..||...|:.:....:..: |.:.||.| ..:...|.:.:..:::.:|:
  Fly   186 GNCAFGLNCNSLYDPKAEFVSIGKRAITEHRYGNM-LDIFLFGF-PKLSRRLRLKLNIQEAEDFY 248

  Rat   248 KKFVYRMKETRLDSVQKHRVDFLQLMMNAHNDSKDKESHTALSDMEITAQSIIFIFAGYEPTSST 312
            .|.|....:.||.:.:| |.||:..::..:.:.:...|...|:..|:.||:.||..||:|.:|:|
  Fly   249 TKIVRETIDYRLRTKEK-RNDFMDSLIEMYKNEQSGNSEDGLTFNELLAQAFIFFVAGFETSSTT 312

  Rat   313 LSFVLHSLATHPDTQKKLQEEIDRAL-PNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERVC 376
            :.|.|:.||.:.|.|.||:|||.... .:....||:.:.||:||:.|:.||||.||:...|.|:.
  Fly   313 MGFALYELARNQDVQDKLREEIGNVFGKHNKEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMT 377

  Rat   377 KKDV--EINGVFMPKGSVVMIPSYALHRDPQHWPEPEEFRPERFSKENKGSIDPYVYLPFGNGPR 439
            ..|.  |....|:.||::|:||:..:|.||..:||||.|:||||:.|...:.....:||||.|||
  Fly   378 DTDFSPEDPKYFIAKGTIVVIPALGIHYDPDIYPEPEIFKPERFTDEEIAARPSCTWLPFGEGPR 442

  Rat   440 NCIGMRFALMNMKLALTKVLQNFSFQPCKETQIPLKLSRQGLL 482
            ||||:||.:|...:.|..:::.:.|....|||||:|:..:.:|
  Fly   443 NCIGLRFGMMQTCVGLAYLIRGYKFSVSPETQIPMKIVVKNIL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a23-3a1NP_037237.2 p450 39..492 CDD:278495 152/473 (32%)
Cyp6a17NP_001286433.1 p450 36..478 CDD:278495 149/459 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 256 1.000 Domainoid score I1960
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm8924
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

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