DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp3a23-3a1 and Cyp6a20

DIOPT Version :9

Sequence 1:NP_037237.2 Gene:Cyp3a23-3a1 / 25642 RGDID:628626 Length:502 Species:Rattus norvegicus
Sequence 2:NP_611002.3 Gene:Cyp6a20 / 36664 FlyBaseID:FBgn0033980 Length:501 Species:Drosophila melanogaster


Alignment Length:542 Identity:176/542 - (32%)
Similarity:275/542 - (50%) Gaps:108/542 - (19%)


- Green bases have known domain annotations that are detailed below.


  Rat    15 LAVVLVLLYGFGT-------RTHGLFKKQGIPGPKP-LPFFGT----VLNYYMGLWKFDVECHKK 67
            :||::|||.|..|       :....:|::|||..:| :|:..|    ...::..::|      :.
  Fly     1 MAVMIVLLIGVITFVAWYVHQHFNYWKRRGIPHDEPKIPYGNTSELMKTVHFADIFK------RT 59

  Rat    68 YGKIWGLFDGQMPLF--------AITDTEMIKNVLVKECF------SVFTNRRDFGPVGIMGKAI 118
            |.|:....||....|        .:||.:..|.||::| |      .||.|.|| .|:    .|.
  Fly    60 YNKLRNKTDGPFVGFYMYFKRMVVVTDIDFAKTVLIRE-FDKFHDRGVFHNERD-DPL----SAN 118

  Rat   119 SVSKD-EEWKRYRALLSPTFTSGRLKEMFPVIEQYGDILVKYLRQ---EKGKPVPVKEVFGAYSM 179
            .|:.| ::||..|..|:||||||::|.|||.|...||.|::...:   .....:.:..|...::.
  Fly   119 LVNIDGQKWKTLRQKLTPTFTSGKMKTMFPTILTVGDELIRVFGETASADSDSMEITNVVARFTA 183

  Rat   180 DVITSTSFGVNVDSLNNPKDPFVE------------KAKKLLRIDFFDPLFLSVVLFPFL---TP 229
            |||.|.:||::..||::||..||:            |:..||       ||.:..|...|   ..
  Fly   184 DVIGSCAFGLDCHSLSDPKAKFVQMGTTAITERRHGKSMDLL-------LFGAPELAAKLRMKAT 241

  Rat   230 VYEM----LNICMFPKDSIEFFKKFVYRMKETRLDSVQKHRVDFLQLM--MNAHNDSKDKESHTA 288
            |.|:    :||.   :|:::      ||:|    ::|::|  ||:.::  |....|:.|||:  .
  Fly   242 VQEVEDFYMNII---RDTVD------YRVK----NNVKRH--DFVDMLIEMKLKFDNGDKEN--G 289

  Rat   289 LSDMEITAQSIIFIFAGYEPTSSTLSFVLHSLATHPDTQKKLQEEIDRAL-PNKAPPTYDTVMEM 352
            |:..||.||:.||..||:|.:|:|:.|.|:.||.|.|.|.||:.||:..| .:.....||::.||
  Fly   290 LTFNEIAAQAFIFFLAGFETSSTTMGFALYELACHQDIQDKLRTEINTVLKQHNGKLDYDSMREM 354

  Rat   353 EYLDMVLNETLRLYPIGNRLERVC---------KKDVEINGVFMPKGSVVMIPSYALHRDPQHWP 408
            .||:.|::||:|..|:...|.||.         |.::|       ||:.|::|:.|:|.||:.:|
  Fly   355 TYLEKVIDETMRKRPVVGHLIRVATQHYQHTNPKYNIE-------KGTGVIVPTLAIHHDPEFYP 412

  Rat   409 EPEEFRPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQ--PCKETQ 471
            |||:|.||||.::.........:||||:|||||||:||..|.:.:.:..::.||.|:  |.| |.
  Fly   413 EPEKFIPERFDEDQVQQRPACTFLPFGDGPRNCIGLRFGRMQVIVGMALLIHNFKFEFHPTK-TV 476

  Rat   472 IPLKLSRQGLLQPTK-PIILKV 492
            :||:......|..:| .|.|||
  Fly   477 VPLEYRTDDFLLSSKGGIHLKV 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a23-3a1NP_037237.2 p450 39..492 CDD:278495 164/509 (32%)
Cyp6a20NP_611002.3 p450 32..496 CDD:278495 163/507 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 256 1.000 Domainoid score I1960
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm8924
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

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