DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp3a23-3a1 and Cyp6a23

DIOPT Version :9

Sequence 1:NP_037237.2 Gene:Cyp3a23-3a1 / 25642 RGDID:628626 Length:502 Species:Rattus norvegicus
Sequence 2:NP_611000.2 Gene:Cyp6a23 / 36661 FlyBaseID:FBgn0033978 Length:502 Species:Drosophila melanogaster


Alignment Length:510 Identity:167/510 - (32%)
Similarity:272/510 - (53%) Gaps:50/510 - (9%)


- Green bases have known domain annotations that are detailed below.


  Rat    14 LLAVVLVLLYGFGTRTHGLFKKQGIPGPKPLPFFGTVLNY----YMGLWKFDVECHKKYGKIWGL 74
            |:|:::.||.....|.||.::::|||...|.|.:|.:.::    ::.:...|.  :.||.:....
  Fly     7 LIALLVSLLLFMARRRHGYWQRRGIPHDVPHPIYGNMKDWPKKRHIAMIFRDY--YTKYKRSVYP 69

  Rat    75 FDGQMPLF----AITDTEMIKNVLVKECFSVFTNRRDFGPVGI--------MGKAISVSKDEEWK 127
            |.|....|    .|||.|::|.||:|: |:.|.||      ||        :...:...:.::|:
  Fly    70 FAGFYFFFTRSAVITDLELVKRVLIKD-FNHFENR------GIFYNEIDDPLSATLFSIEGQKWR 127

  Rat   128 RYRALLSPTFTSGRLKEMFPVIEQYGDILVKYLRQE----KGKPVPVKEVFGAYSMDVITSTSFG 188
            ..|..|:||||||::|.|||:|.:.|:.:.|....:    :|:.:.:.::...|:.|||.:.:||
  Fly   128 HLRHKLTPTFTSGKMKNMFPIIVKVGEEMEKIFSAKTTTGEGQVLEIVDLVARYTADVIGNCAFG 192

  Rat   189 VNVDSLNNPKDPFVEKAKKLL-------RIDFFDPLFLSVVLFPFLTPVYEMLNICMFPKDSIEF 246
            :|.:||.||...||...|:.:       .:||.      :..||.|:   ..|.:.:..:|..:|
  Fly   193 LNCNSLQNPNAEFVTIGKRAIIERRYGGLLDFL------IFGFPKLS---RRLRLKLNVQDVEDF 248

  Rat   247 FKKFVYRMKETRLDSVQKHRVDFLQLMMNAHNDSKDKESHTALSDMEITAQSIIFIFAGYEPTSS 311
            :...|....:.||.:.:| |.||:..::..:...:...:...||..||.||:.||..||:|.:|:
  Fly   249 YTSIVRNTIDYRLRTNEK-RHDFMDSLIEMYEKEQAGNTEDGLSFNEILAQAFIFFVAGFETSST 312

  Rat   312 TLSFVLHSLATHPDTQKKLQEEIDRAL-PNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERV 375
            |:.|.|:.||...|.|.:|:.||:..| .:....||:.:.||:||:.|:.||||.||:...|.|:
  Fly   313 TMGFALYELALDQDIQDQLRAEINNVLSKHNNEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRM 377

  Rat   376 CKKDV--EINGVFMPKGSVVMIPSYALHRDPQHWPEPEEFRPERFSKENKGSIDPYVYLPFGNGP 438
            .:.|.  |....|:.||:.|:||:..:|.||:.:||||:|:||||:.|...:.....:||||.||
  Fly   378 TQTDFSPEDPKYFIAKGTTVVIPALGIHYDPEIYPEPEKFKPERFTDEAIAARPSCTWLPFGEGP 442

  Rat   439 RNCIGMRFALMNMKLALTKVLQNFSFQPCKETQIPLK-LSRQGLLQPTKPIILKV 492
            |||||:||.||...:.|..:::.:.|....|||||:| :.:..||.....|.|||
  Fly   443 RNCIGLRFGLMQACVGLAYLIRGYKFSVSTETQIPMKFVVKSILLSAENGIHLKV 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a23-3a1NP_037237.2 p450 39..492 CDD:278495 156/483 (32%)
Cyp6a23NP_611000.2 p450 36..495 CDD:278495 154/477 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 256 1.000 Domainoid score I1960
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm8924
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

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