DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp3a23-3a1 and Cyp6a13

DIOPT Version :9

Sequence 1:NP_037237.2 Gene:Cyp3a23-3a1 / 25642 RGDID:628626 Length:502 Species:Rattus norvegicus
Sequence 2:NP_610390.1 Gene:Cyp6a13 / 35837 FlyBaseID:FBgn0033304 Length:493 Species:Drosophila melanogaster


Alignment Length:500 Identity:170/500 - (34%)
Similarity:272/500 - (54%) Gaps:41/500 - (8%)


- Green bases have known domain annotations that are detailed below.


  Rat     7 LTLETWVLLAVVLVLLYGFGTRTH-GLFKKQGIPGPKPLPFFGTVLNYYMGL-W-KFDVECHKKY 68
            |||  .||:..|.:||| ...|.| ..:.::|:.|.:|:.|.|.:......| | ..::..::|:
  Fly     2 LTL--LVLVFTVGLLLY-VKLRWHYSYWSRRGVAGERPVYFRGNMSGLGRDLHWTDINLRIYRKF 63

  Rat    69 ---GKIWGLFDGQMPLFAITDTEMIKNVLVKECFSVFTNRRDFGPV---GIMGKAISVSKDEEWK 127
               .:..|.|........|.|.|:|::::::: ||.|.:|..|..|   .:.|..:.:. ..||:
  Fly    64 RGVERYCGYFTFMTKSLFIMDLELIRDIMIRD-FSSFADRGLFHNVRDDPLTGNLLFLD-GPEWR 126

  Rat   128 RYRALLSPTFTSGRLKEMFPVIEQYGDILVKYLRQEKGKPVPVKEVFGAYSMDVITSTSFGVNVD 192
            ..|..|:..||||::|.|||.:.:.|:.|.:..|.:.|: :..|::...::.|||.|.:||:..:
  Fly   127 WLRQNLTQVFTSGKMKFMFPNMVEVGEKLTQACRLQVGE-IEAKDLCARFTTDVIGSCAFGLECN 190

  Rat   193 SLNNPKDPFVEKAKKLLRIDFFDPLF-LSVVLFPFLTP-VYEMLNICMFPKDSIEFFKKFV---- 251
            ||.:|:..|....:.:.:    :||. :.|..|.|..| :...|...:|..:..|||...|    
  Fly   191 SLQDPESQFRRMGRSVTQ----EPLHSVLVQAFMFAQPELARKLRFRLFRPEVSEFFLDTVRQTL 251

  Rat   252 -YRMKETRLDSVQKHRVDFLQLMMNAHNDS-KDKESHTALSDMEITAQSIIFIFAGYEPTSSTLS 314
             ||.:|      ..||.|.:||:|....:. ||     |||..:|.||:::|..||::.:|:|:|
  Fly   252 DYRRRE------NIHRNDLIQLLMELGEEGVKD-----ALSFEQIAAQALVFFLAGFDTSSTTMS 305

  Rat   315 FVLHSLATHPDTQKKLQEEIDRALP-NKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERVCKK 378
            |.|:.||.:||.|::|:.|:...|. |....|||:|.||.|||.|:.||||.|||...|.|...|
  Fly   306 FCLYELALNPDVQERLRVEVLAVLKRNNQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTK 370

  Rat   379 DVEI--NGVFMPKGSVVMIPSYALHRDPQHWPEPEEFRPERFSKENKGSIDPYVYLPFGNGPRNC 441
            :.:|  :.:.:..||.::||.:::|.||:.:|:||:|.|.||..|...:..|:.|||||.|||||
  Fly   371 EYQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPEKFDPSRFEPEEIKARHPFAYLPFGEGPRNC 435

  Rat   442 IGMRFALMNMKLALTKVLQNFSFQPCKETQIPLKLSRQGLLQPTK 486
            ||.||..:.:|:.|..:|::|.|...::||||||.|.:..|..|:
  Fly   436 IGERFGKLQVKVGLVYLLRDFKFSRSEKTQIPLKFSSRNFLISTQ 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a23-3a1NP_037237.2 p450 39..492 CDD:278495 158/466 (34%)
Cyp6a13NP_610390.1 p450 33..476 CDD:278495 156/460 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 256 1.000 Domainoid score I1960
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm8924
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

Return to query results.
Submit another query.