DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp3a23-3a1 and Cyp6a14

DIOPT Version :9

Sequence 1:NP_037237.2 Gene:Cyp3a23-3a1 / 25642 RGDID:628626 Length:502 Species:Rattus norvegicus
Sequence 2:NP_001286199.1 Gene:Cyp6a14 / 35835 FlyBaseID:FBgn0033302 Length:509 Species:Drosophila melanogaster


Alignment Length:531 Identity:179/531 - (33%)
Similarity:268/531 - (50%) Gaps:73/531 - (13%)


- Green bases have known domain annotations that are detailed below.


  Rat     9 LETWVLLAVVLVLLYGFGTRTHGLFKKQGIPGPKPLPFFGTVLNYYMGLWKFDVECHKKY----- 68
            |.|..|:.|||.|.|....:....:|::|:|...|||..|.:....           |||     
  Fly     2 LFTIALVGVVLGLAYSLHIKIFSYWKRKGVPHETPLPIVGNMRGIV-----------KKYHFRDI 55

  Rat    69 -GKIWGLFDGQMPLFA----------ITDTEMIKNVLVKECFS------VFTNRRDFGPVGIMGK 116
             .:|:..|.||.|:..          |||.:.||.|::|: ||      .|||.||....|    
  Fly    56 NQRIYKKFKGQGPIAGMYMFFKRTALITDLDFIKQVMIKD-FSYFQDRGAFTNPRDDPLTG---- 115

  Rat   117 AISVSKDEEWKRYRALLSPTFTSGRLKEMFPVIEQYG-------DILVKYLRQEKGKPVPVKEVF 174
            .:...:.|||:..|..|:|.||||::|:|..||...|       |..||..:.|:|. |.:|::.
  Fly   116 HLFALEGEEWRAMRHKLTPVFTSGKIKQMSKVIVDVGLRLGDAMDKAVKEAKVEEGN-VEIKDLC 179

  Rat   175 GAYSMDVITSTSFGVNVDSLNNPKDPFVEKAKKLLRIDFFDPLFLSVVLFPFL---TPVYEMLNI 236
            ..::.|||.|.:||:..:||.:|...|.:|.:::     |.....|.::..|:   ..:...|.|
  Fly   180 ARFTTDVIGSCAFGLECNSLQDPSAEFRQKGREI-----FTRRRHSTLVQSFIFTNARLARKLRI 239

  Rat   237 CMFPKDSIEFFKKFVYRMKETRLDSVQKHRVDFLQLMMNAHNDSKDKE----------SHTALSD 291
            .:.|.|..:||...|....:.||.:..| |.||::.|:...  ::|:|          || .|:.
  Fly   240 KVLPDDLTQFFMSTVKNTVDYRLKNGIK-RNDFIEQMIELR--AEDQEAAKKGQGIDLSH-GLTL 300

  Rat   292 MEITAQSIIFIFAGYEPTSSTLSFVLHSLATHPDTQKKLQEEIDRALPN--KAPPTYDTVMEMEY 354
            .::.||:.:|..||:|.:|||:|..|:.||..||.|::|:|||:..|.|  .....||.:.:|.|
  Fly   301 EQMAAQAFVFFVAGFETSSSTMSLCLYELALQPDIQQRLREEIESVLANVDGGELNYDVLAQMTY 365

  Rat   355 LDMVLNETLRLYPIGNRLERVCKKDVEI--NGVFMPKGSVVMIPSYALHRDPQHWPEPEEFRPER 417
            ||.||:||||.:|:...|.|...||.:|  :.:.:.||.:.:||.:.:|.||:.:||||:|.|.|
  Fly   366 LDQVLSETLRKHPLLPHLIRETTKDYQIPNSDIVLDKGILALIPVHNIHHDPEIYPEPEKFDPSR 430

  Rat   418 FSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQIPLKLSRQGLL 482
            |..|...:..|..|||||:|||||||:||..:..|:.|..:|:.|.|.....|.:||..|::..|
  Fly   431 FDPEEVKNRHPMAYLPFGDGPRNCIGLRFGKIQAKIGLVSLLRRFKFSVSNRTDVPLIFSKKSFL 495

  Rat   483 QPTKP-IILKV 492
            ..|.. |.|||
  Fly   496 LTTNDGIYLKV 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a23-3a1NP_037237.2 p450 39..492 CDD:278495 167/499 (33%)
Cyp6a14NP_001286199.1 p450 32..506 CDD:306555 167/499 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 256 1.000 Domainoid score I1960
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm8924
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

Return to query results.
Submit another query.