DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp3a23-3a1 and Cyp28c1

DIOPT Version :10

Sequence 1:NP_037237.2 Gene:Cyp3a23-3a1 / 25642 RGDID:628626 Length:502 Species:Rattus norvegicus
Sequence 2:NP_572752.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster


Alignment Length:528 Identity:132/528 - (25%)
Similarity:232/528 - (43%) Gaps:74/528 - (14%)


- Green bases have known domain annotations that are detailed below.


  Rat    15 LAVVLVLLYGFGTRTHGLFKKQGIPGPKPLPFFGTVLNYYMGLWKF-----DVECHKKYGKIW-G 73
            :|.:|..:|.|.....|.::::|:..|:.||.||:..|.......|     |:..|.:....: |
  Fly     9 IATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRNTHSYVG 73

  Rat    74 LFDGQMPLFAITDTEMIKNVLVKECFSVFTNRRDFGPVGIMGKAISVSKD------------EEW 126
            .:..:.|...:.:..::..:.| ..||.|.|..       ..|.:.::||            |||
  Fly    74 CYLLRAPKLLVLEPRLVYEIYV-SAFSHFENND-------ASKMVDIAKDRLVALNPFVLEGEEW 130

  Rat   127 KRYRALLSPTFTSGRLKEMFPVIEQYGDILVKY--LRQEKGKPVPVKEVFGAYSMDVITSTSFGV 189
            :..||:.|...|:||::....::::....|.::  ::...||.:...::...::.:.:.....|:
  Fly   131 RHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGI 195

  Rat   190 NVDSLNNPKDPFVEKAKKLLRIDFFDPLFLSVV-----LFPFLTPVYEMLNICMFPKDSIEFFKK 249
            ...:..:...|.|.:..::..    :...|::.     |||.|.   ..|...:||:....|:.:
  Fly   196 QARTFTDNPLPVVRQNHEMSA----ENRGLAIAGAVHGLFPNLP---RWLRPKVFPRSHDRFYGQ 253

  Rat   250 FVYRMKETRLDSVQKHRVDFLQLMMNAHNDSKDKESHTALSDMEITAQSIIFIFAGYEPTSSTLS 314
            .:......| .|..:.|.||:       |...:.:....||:.::.:.::.|:|.|.:.||::::
  Fly   254 MISEALRLR-RSKHQERNDFI-------NHLLEMQRELDLSEEDMASHAMTFMFDGLDTTSNSIA 310

  Rat   315 FVLHSLATHPDTQKKLQEEIDRALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERVCKKD 379
            ..|..|..:||.|::|.||:....|....|..|.::::.||....||:||:||.|....:.|.|:
  Fly   311 HCLLLLGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWASKTCTKE 375

  Rat   380 VEING------VFMPKGSVVMIPSYALHRDPQHWPEPEEFRPERFSKEN-KGSIDPYVYLPFGNG 437
            .|:.|      :.:..|..||:|.||||.||..:|||:.||||||.... |......::|.||||
  Fly   376 YELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQGIFLGFGNG 440

  Rat   438 PRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQIPLKLSRQGLLQPTKPII----------LKV 492
            ||.|:|||..|...|.||..::|.|.......|....:|.         |:|          |:.
  Fly   441 PRQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTLNGTELD---------PLIFVGVHKGGIWLQF 496

  Rat   493 VPRDEIIT 500
            |||..:.|
  Fly   497 VPRKNVTT 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a23-3a1NP_037237.2 CYP3A 67..491 CDD:410743 112/460 (24%)
Cyp28c1NP_572752.1 CYP6-like 67..493 CDD:410679 112/457 (25%)

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