DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp3a23-3a1 and Cyp6a16

DIOPT Version :10

Sequence 1:NP_037237.2 Gene:Cyp3a23-3a1 / 25642 RGDID:628626 Length:502 Species:Rattus norvegicus
Sequence 2:NP_001285631.1 Gene:Cyp6a16 / 19836250 FlyBaseID:FBgn0031726 Length:498 Species:Drosophila melanogaster


Alignment Length:520 Identity:165/520 - (31%)
Similarity:264/520 - (50%) Gaps:65/520 - (12%)


- Green bases have known domain annotations that are detailed below.


  Rat    11 TWVLLAVVLVLLYGFGTRTHGLFKKQGIPGPKPLPFFGTVLN----YYMGLWKFDVECHKKYGKI 71
            |.:||..:|..|.|:.......::.:|||..:|...||....    :|..|.:...:..:...|:
  Fly     4 TLLLLTSLLSFLLGYLRYRFTYWELRGIPQLRPHFLFGHFFRLQSVHYSELLQETYDAFRGSAKV 68

  Rat    72 WGLFDGQMPLFAITDTEMIKNVLVKECFSVFTNRRDFGPVGIMGKAISVSKDEEWKRYRALLSPT 136
            .|.:....|:..:.|.:::|.||::: |:.|.:||.|....:.....:: :.|||:..|..||||
  Fly    69 AGTYVFLRPMAVVLDLDLVKAVLIRD-FNNFVDRRSFHGDPLTANLFNL-QGEEWRNLRTKLSPT 131

  Rat   137 FTSGRLKEMF----PVIEQYG---DILVKYLRQEKGKPVPVKEVFGAYSMDVITSTSFGVNVDSL 194
            ||||::|.||    .|.:|.|   |.||    ..:|..:.:.::...|:.|||.|.:||....||
  Fly   132 FTSGKMKYMFGTVSTVAQQLGGTFDELV----GSQGAVLELHDLMARYTTDVIGSCAFGTECSSL 192

  Rat   195 NNPKDPFVEKAKKL-------LRIDFFDPLFLSV---------VLFPFLTPVYEMLNICMFPKDS 243
            ..|:..|.:..:::       :|...|...:||.         :|.|.:|               
  Fly   193 REPQAEFRQVGRRIFRNSNRSIRWRIFKMTYLSSLAKLGLPVRILHPDIT--------------- 242

  Rat   244 IEFFKKFVYRMKETRLDSVQKHRVDFLQLMMNAHNDSKDKESHTALSDMEITAQSIIFIFAGYEP 308
             :||.:.|....|.| :.....|.||:.|::    |.:.:|:...|:..::.||:.:|..||:|.
  Fly   243 -KFFNRIVRETVELR-ERENIRRNDFMDLLL----DLRRQENGKGLTMEQMAAQAFVFFVAGFET 301

  Rat   309 TSSTLSFVLHSLATHPDTQKKLQEEIDRALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLE 373
            :||.:|:.|..||.:.|.|:||:.||:.::......||:.:|||.|||..:.||||.||..:.|.
  Fly   302 SSSNMSYALFELAKNQDVQQKLRMEINDSIGKHGKLTYEAMMEMPYLDQTITETLRKYPALSSLT 366

  Rat   374 RVCKKDVEI------NGVFMPKGSVVMIPSYALHRDPQHWPEPEEFRPERFSKENKGSIDPYVYL 432
            |:..:|.||      :.|.:.||:.|.||..|:|.||:.:|||.|||||||:.:......|..:|
  Fly   367 RLASEDYEIPSPDGGDPVVLEKGTSVHIPVLAIHYDPEVYPEPHEFRPERFAPDACRERHPTAFL 431

  Rat   433 PFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQ--PCKETQIPLKLSRQGL-LQPTKPIILKVVP 494
            .||:|||||||:||..|.:|:.|..:|:.|.|.  |...||  ||::::.| |.|:..:.|:|.|
  Fly   432 GFGDGPRNCIGLRFGRMQVKVGLITLLRRFRFSLPPGSPTQ--LKVTKRNLILLPSDGVRLQVDP 494

  Rat   495  494
              Fly   495  494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a23-3a1NP_037237.2 CYP3A 67..491 CDD:410743 148/455 (33%)
Cyp6a16NP_001285631.1 CYP6-like 64..489 CDD:410679 148/453 (33%)

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