Sequence 1: | NP_004952.2 | Gene: | GABRE / 2564 | HGNCID: | 4085 | Length: | 506 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
Alignment Length: | 616 | Identity: | 154/616 - (25%) |
---|---|---|---|
Similarity: | 248/616 - (40%) | Gaps: | 157/616 - (25%) |
- Green bases have known domain annotations that are detailed below.
Human 25 TESKNEASSRDVVYGPQPQ-PL-------ENQLLSEETKSTETET-------GSRVGKLPEASRI 74
Human 75 LNTILSNYDHKLRPGIGEKPTVVTVEISVNSLGPLSILDMEYTIDIIFSQTWYDERLCYNDT--F 137
Human 138 ESLVLNGNVVSQLWIPDTFFRNSKRTHEHEITMPNQMVRIYKDGKVLYTIRMTIDAGCSLHMLRF 202
Human 203 PMDSHSCPLSFSSFSYPENEMIYKWENFKLEINEKNSWKLFQFDFTGVSNKTEIITTPVGDFMVM 267
Human 268 TIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGITSVLTMTTLGTFSRKNFP 332
Human 333 RVSYITALDFYIAICFVFCFCALLEFAVLNFLI--------------------------YNQTKA 371
Human 372 HASPKL---------------------------------------RHPRINSRAHA--------- 388
Human 389 ------RTRARSRACA----------------RQHQEAFVCQIVTTEGSDGEERPSCSAQQ---P 428
Human 429 PSPGS--------PEG--------PRSLC--SKLACCEWCKRFKKYFCMVPDCEGSTWQQGRLCI 475
Human 476 HVYRLDNYSRVVFPVTFFFFNVLYWLVCLNL 506 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GABRE | NP_004952.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 23..66 | 13/55 (24%) | |
Neur_chan_LBD | 71..276 | CDD:280998 | 62/206 (30%) | ||
Neur_chan_memb | 285..>408 | CDD:280999 | 45/218 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 413..438 | 9/43 (21%) | |||
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 53/182 (29%) |
Neur_chan_memb | 274..588 | CDD:397193 | 71/332 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |